Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 625 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  189 bits (481), Expect = 3e-52
 Identities = 117/337 (34%), Positives = 173/337 (51%), Gaps = 54/337 (16%)

Query: 424 ALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSFKPFIYSAALDNG-YTAASLV 482
           ALV++DP+   I+A+VGG  +  S YNR TQA+RQPGS+FKPF++ AAL  G Y   S +
Sbjct: 342 ALVAIDPRTHFIKAMVGGVDYRTSQYNRVTQARRQPGSAFKPFVFYAALATGKYRPNSSI 401

Query: 483 NDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALYKSRNLVSIRLLQAMGVGKTIDYMT 542
            D P+ +  +   + + P+N   +F G + +  AL +SRN+ ++RL Q +G+ + I+   
Sbjct: 402 ADTPVTY--QLGAETYSPQNYDRSFAGNMSLTSALAQSRNIPAVRLGQTVGLDRVIEICR 459

Query: 543 RFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKIAPYLIDKIESRNGDTLFTA 602
           R G S S + P +SL LG   +TP+E+   ++T A+GG+   P LI ++    G  L   
Sbjct: 460 RIGIS-SPMQPVVSLPLGAIGVTPLELTNAYATLASGGWYAPPTLILQVRDSQGRRLLDH 518

Query: 603 NPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNAAATEPQTPAVAERIVDGRT 662
            P                            P P           E Q+ AVA+       
Sbjct: 519 TP---------------------------RPQP-----------ELQSKAVAQ------- 533

Query: 663 TYILNSILEDVIKKGTGRRALALGRPDIAGKTGTTNESKDAWFSGYNADYVTTVWTGYDQ 722
              LN +++ V+  GTG RA    RP +AGKTGTT++ +D WF GY  D   +VW G D 
Sbjct: 534 ---LNQMMQAVVTSGTG-RAAQFNRP-VAGKTGTTSDERDIWFVGYTPDLAASVWLGNDD 588

Query: 723 PESLGRREFGGTVALPIWMSYMGAALKDKPPHTQPEP 759
              +G    GG +A PIW  +M  AL  +P  + P+P
Sbjct: 589 NSKIGGGATGGAIAAPIWREFMQQALAQQPVESFPKP 625



 Score =  173 bits (439), Expect = 2e-47
 Identities = 111/329 (33%), Positives = 171/329 (51%), Gaps = 21/329 (6%)

Query: 8   FGYSIVAI--VCGLLLVFSGAYLYLSPGLPSVEALRSIQLQIPLRVYSSDEKLIAEF-GE 64
           +G S +AI  V GL L F          LP V  LR         +Y  + +LIA    E
Sbjct: 24  YGSSAIAIGAVLGLALSFRN--------LPDVRLLRRYVPSQTTYIYDINGELIAALHDE 75

Query: 65  MRRTPIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQLVKSGHIQSGGSTITM 124
             R  +    I P    ++L+ ED NF +H G++P  + RA      SG +  GGST+TM
Sbjct: 76  ANRETVPLNQISPKLQQSVLAIEDSNFYDHPGINPIGIGRAIVANFSSGGVVEGGSTLTM 135

Query: 125 QVAKNFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKIYLGNRAYGIEAASQVY 184
           Q+ KN FLT +R+F RK +E +LAL++E+ ++KD ILELY+N++Y G   YG+E AS+ Y
Sbjct: 136 QLVKNLFLTPDRNFGRKLSEAVLALRLEQVISKDRILELYLNQVYWGRNLYGVEMASRSY 195

Query: 185 YGKSIRDASLAQMAMIAGLPKAPSRFNPL--------ANPARSKERRDWILGRMYKLGKI 236
           + KS  +   A+ + +AGL  AP  + P             R+KER+  +L R+ ++G++
Sbjct: 196 FNKSAANLDWAEASFLAGLIAAPEFYTPFDERDRLSPQRLERAKERQRLVLQRLVEIGQL 255

Query: 237 DQAAYESAIAEPLNASYHVPTPEVNAPYIAEMARAEMVGRYGSEAYTE-GFRVTTTVPSN 295
             +A  +A AEPL           +APY+++    E+  ++G  A  + G RV TT+   
Sbjct: 256 SPSAASAAAAEPLKFGEISSFRPSSAPYVSDAVIQELAQQFGRSAVVQGGLRVQTTIDLR 315

Query: 296 LQEIANDSVHSGLITYDQRHGYRGPESRL 324
           +Q +A   +       ++R G R  E  L
Sbjct: 316 MQRLAEKVIQEN-YQRNRRAGLRADEMAL 343