Pairwise Alignments

Query, 820 a.a., peptidase from Pseudomonas simiae WCS417

Subject, 712 a.a., Penicillin-binding protein 1A from Synechococcus elongatus PCC 7942

 Score =  179 bits (454), Expect = 5e-49
 Identities = 120/354 (33%), Positives = 176/354 (49%), Gaps = 58/354 (16%)

Query: 404 RVQRQKDDSLKFSQVPLAQGALVSLDPQNGAIRALVGGFAFEQSNYNRATQAKRQPGSSF 463
           R Q+  D +++ S     QGALVS+DP++GAIRA+VGG  F +S +NRATQA RQPGS+F
Sbjct: 278 RWQQAADQAIQNSTYGSLQGALVSIDPRDGAIRAMVGGVDFNRSQFNRATQAYRQPGSTF 337

Query: 464 KPFIYSAALDNGYTAASLVNDAPIVFVDEYLDKVWRPKNDTNTFLGPIRIREALYKSRNL 523
           K F+Y+AA+ +G + + +  DA I          ++P+N + +F G I + +AL  S N+
Sbjct: 338 KMFVYAAAIASGMSPSQVYLDAAINLGG------YKPQNFSRSFSGSISLTQALTNSVNI 391

Query: 524 VSIRLLQAMGVGKTIDYMTRFGFSKSDLPPNLSLALGTATLTPMEIATGWSTFANGGYKI 583
           V+I++L+ +G+   I    + G  ++DL     LALG + +T +EI + + T AN G  +
Sbjct: 392 VAIKVLRDVGIDNVIRVARQMGI-RADLARYYPLALGASDVTLLEITSAYGTLANQGKYL 450

Query: 584 APYLIDKIESRNGDTLFTANPPRVPGDVVNGVAATDGLAAPSNGGITIEPAPGTTPATNA 643
            P+ I +I    G  L+                              I+P     P + A
Sbjct: 451 TPHPIAEIIDHRGRVLYQDK--------------------------QIKPVQALDPGSAA 484

Query: 644 AATEPQTPAVAERIVDGRTTYILNSILEDVIKKGTGRRALALGRPDIAGKTGTTNESKDA 703
                                I+ S+LE V+  GTG  A    R  +AGKTGTT +++D 
Sbjct: 485 ---------------------IVTSMLERVVTSGTGAAAYLPDRA-VAGKTGTTEQARDL 522

Query: 704 WFSGYNADYVTTVWTGYDQPESLGRREFGGTVALPIWMSYMGAALKDKPPHTQP 757
           WF GY    VT VW GYD     G    G + A   W  +M  A+KD PP   P
Sbjct: 523 WFIGYIPQLVTGVWLGYDNFAPTGS---GSSAAAVAWYRFMVEAIKDLPPEKFP 573



 Score =  171 bits (432), Expect = 2e-46
 Identities = 100/278 (35%), Positives = 151/278 (54%), Gaps = 10/278 (3%)

Query: 49  LRVYSSDEKLIAEFGEMRRTPIRFADIPPNFISALLSAEDDNFANHYGVDPSSLVRAATQ 108
           + + S+D  ++ + G   R  + F  IP     A L+AED  F  H G+D   + RA+  
Sbjct: 30  ITILSADNTVLQKIGPATRDKVPFKQIPLRLRQAFLAAEDRRFYEHSGIDLFGIARASVT 89

Query: 109 LVKSGHIQSGGSTITMQVAKNFFLTSERSFSRKATEILLALQIERQLTKDEILELYVNKI 168
            + SG +Q G STIT Q+A+  FL+ ERS  RK  E L+A ++E++LTKD+ILE Y+N +
Sbjct: 90  NLLSGQVQEGASTITQQLARIVFLSQERSLQRKLNEALMAQKLEQELTKDQILEQYLNLV 149

Query: 169 YLGNRAYGIEAASQVYYGKSIRDASLAQMAMIAGLPKAPSRFNPLANPARSKERRDWILG 228
           YLG  AYG+  A+  Y+ K ++D SL +MA +AGLP AP+ ++PL +   ++ERR+ +L 
Sbjct: 150 YLGAGAYGVADAAWTYFSKPVQDLSLGEMATLAGLPPAPTAYSPLVSLEVAQERRNSVLS 209

Query: 229 RMYKLGKIDQAAYESAIAEPLNASYHVPT-PEVNAPYIAEMARAEM-------VGRYGSE 280
           RM ++G I  +  E+A  EPL      P   +  APY  +  R E+       V  YG  
Sbjct: 210 RMQEVGFITPSEAEAARREPLALKPAAPKYAQSLAPYFTDYVRQELPRFVAPDVLEYGGL 269

Query: 281 AY--TEGFRVTTTVPSNLQEIANDSVHSGLITYDQRHG 316
               T  +R        +Q     S+   L++ D R G
Sbjct: 270 TLKTTLNYRWQQAADQAIQNSTYGSLQGALVSIDPRDG 307