Pairwise Alignments

Query, 262 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

 Score =  126 bits (317), Expect = 5e-34
 Identities = 85/259 (32%), Positives = 139/259 (53%), Gaps = 28/259 (10%)

Query: 19  LDALLQDATAQEFPEPILVLEPAVEPEAVLDEFQ-----LAVLEEQARDARSVVPM---- 69
           L+ +L++ TA+     I  ++P V+P +V++E Q      + +E       SV+      
Sbjct: 85  LEQILEENTAK-----IAKIDPVVQPCSVVEEIQEWEIETSYVEPDIETPESVIEDDLEP 139

Query: 70  ----TPQVAPVVVAPAVVEPVVEVHLPPS-ITPPPVAGDDR-PSWA----AEPFECLLFD 119
               T     + +  ++ EPV EV +  +   P   AG ++  +W      + F+ L FD
Sbjct: 140 ESVDTEAEREIAIETSIEEPVAEVPVVEAQAVPETQAGRNKLGTWTNTIREKDFQVLYFD 199

Query: 120 VAGLTLAVPLVCLGSIYSLEGQELTPLFGQPEWFLGILPSQAGNLKVLDTARWVMPDRYR 179
           V G+T AVPL  LG I+ +    L  L G+P W+LG+  ++   L V+DTA+WVM ++ R
Sbjct: 200 VNGVTFAVPLDELGGIHRMT--TLNHLIGRPAWYLGLQTNRDSQLDVVDTAKWVMAEKLR 257

Query: 180 DD-FRQGLQYVISVQGYEWGLAVHQVSRSLRLDPNEIKWRSHRGQRPWLAGTVIEHMCAL 238
           D+ ++Q  QY++ +    WGLA  Q+  +  L   +++WR   G+RPWLAG V E MCAL
Sbjct: 258 DESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCAL 317

Query: 239 LDVAELAELIASGA-VKAM 256
           + V  L  ++ +G  VKA+
Sbjct: 318 IHVQALIAMLNAGLDVKAL 336