Pairwise Alignments

Query, 311 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 306 a.a., chemotaxis protein CheV from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (461), Expect = 1e-50
 Identities = 101/282 (35%), Positives = 162/282 (57%), Gaps = 7/282 (2%)

Query: 22  ILMFRLFGRQ-LFAINVFKVQEVLQLPKLTLMPQRHPFVCGVVNLRGQTLPVIDLSQAIG 80
           +LMF L  +Q LFAI   KV+E++    +T +P  H  V G V +R  T+PVID++ AIG
Sbjct: 14  MLMFTLSAQQQLFAIGTLKVREIVTYQPMTQIPYSHHHVIGTVTIRNLTVPVIDMAAAIG 73

Query: 81  MRPLVPGPNST--IIVTEYNRSVQAFLVGGVDRIVNMNWEAILPPPTSAGRQHYLTAISK 138
            RP+ P       +IVT+  R+V AF+V  +++I+  +W  I   P +AG   ++T I++
Sbjct: 74  FRPIQPSEYQKCYLIVTDCLRTVVAFMVRTIEKIIECDWRQIESSPETAGHDVFVTGITR 133

Query: 139 VDDQLVEIIDVEKVLAEIVPYNAKVSREKLEDPVLERARGREVLLVDDSNVALSQLRDTL 198
             +++V+++DVE +L++I P         L D   ER +   +LLVDDS++A  QL D L
Sbjct: 134 FQNKIVQLLDVELLLSKIYPQYESTKVPMLTDIERERLKPLNILLVDDSSIARKQLSDAL 193

Query: 199 GQLGVKMHIASDGLKALNMLKAWADSGQVMTDKLLMIFTDAEMPEMDGYRLTTEIRNDPR 258
             + +  HI  +G +AL++++  A   + +     ++ +D EMP +DGY L  E++NDP+
Sbjct: 194 DSINIPYHICKNGSEALDLMRDMARDHRAID----ILVSDIEMPGLDGYELAFEMQNDPQ 249

Query: 259 LRGLYVVLHTSLSGSFNDSMVKKVGCDNFLSKFQPDKLVDVV 300
           L   Y +LHTSLS         +VG    L KF   +LV+ +
Sbjct: 250 LNHAYCILHTSLSSEICVDRAHQVGAHEALEKFNATELVEAM 291