Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score =  123 bits (309), Expect = 4e-33
 Identities = 89/240 (37%), Positives = 122/240 (50%), Gaps = 36/240 (15%)

Query: 6   IHILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQEN---------GYPEARIVHRL 56
           + +LY+D  ++V+ KP  L+  PG A +    L+  L  +         G     IVHRL
Sbjct: 90  LDVLYEDADLIVLVKPAGLVVHPG-AGNWTGTLVNALIHHCGDSLSGIGGVKRPGIVHRL 148

Query: 57  DWETSGIILLARDADTHRELSRQFHDR----ETEKAYTALAWGQPELDSGSIDLPLRYDP 112
           D +TSG++++A++   HR LS QF D       E+AY A+ WG+P    G ID PL    
Sbjct: 149 DKDTSGVMVVAKNDAAHRHLSDQFADHGRNGPLERAYRAVVWGRPRQLKGKIDAPLGRAG 208

Query: 113 PTKPRHVV--DHEFGKHALTFWKVLERCGDW-------CRVELTPITGRSHQLRVHMLSI 163
               R V   D +  + A+T ++V+ER  +          VE    TGR+HQ+RVHM  I
Sbjct: 209 DRTKRAVKREDSDDAREAITHYEVVERYHEKPDGTSLASTVECHLETGRTHQIRVHMAHI 268

Query: 164 GHPLLGDGLYA----------HEQALAA---WPRLCLHASMLSFTHPQSGERLRFECPAP 210
           GHPL+GD  Y            E A AA   +PR  LHA ML F HP +GE + FE P P
Sbjct: 269 GHPLIGDPDYGAAFRTKANLLPEPARAAVNRFPRQALHAFMLQFEHPATGETMHFETPVP 328