Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 224 a.a., pseudouridylate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (434), Expect = 7e-48
 Identities = 101/212 (47%), Positives = 123/212 (58%), Gaps = 7/212 (3%)

Query: 6   IHILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIIL 65
           + I Y D  ++++NKP+ LLS PG A    D  ITRL    YPEA +VHRLD  TSGI++
Sbjct: 14  LDIRYIDRDLIIINKPSGLLSNPGMAAHTHDSAITRLCRL-YPEAILVHRLDCATSGIMV 72

Query: 66  LARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVVDHEFG 125
            AR       L  QF +R+TEK Y A   G  E D G+IDLPL  D    P   VD   G
Sbjct: 73  FARSKKAESNLKTQFQNRDTEKRYLAQVAGIIEQDEGTIDLPLGKDRSNPPWQKVDMAEG 132

Query: 126 KHALTFWKVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALA----- 180
           + A+T ++VL R  +   V L P TGR+HQLRVHMLS+GHP+LGD  Y   Q        
Sbjct: 133 RPAVTHYRVLARRENSTLVALEPETGRTHQLRVHMLSLGHPILGDDFYGRTQEFGQGTVE 192

Query: 181 -AWPRLCLHASMLSFTHPQSGERLRFECPAPF 211
            A PRLCLHA  LSF HP S + + F   APF
Sbjct: 193 EASPRLCLHAERLSFKHPWSNKPMTFVSRAPF 224