Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 343 a.a., Pseudouridine synthase, RluD (NCBI) from Rhodospirillum rubrum S1H

 Score =  124 bits (310), Expect = 3e-33
 Identities = 77/223 (34%), Positives = 113/223 (50%), Gaps = 20/223 (8%)

Query: 8   ILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQE--------NGYPEARIVHRLDWE 59
           ++Y+DD ++V++K   ++  PG  + +   +   L           G     IVHRLD +
Sbjct: 104 VVYEDDDLIVIDKAAGMVVHPGPGNPDHTLVNALLAHCGPSLSGIGGERRPGIVHRLDKD 163

Query: 60  TSGIILLARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHV 119
           TSG+++ A+    H  L+ QF      + Y  L WG+P   +GSID PL   P  + +  
Sbjct: 164 TSGLMIAAKTDLAHHGLAEQFACHSLTREYLCLVWGRPRPAAGSIDAPLGRHPTQRKKMA 223

Query: 120 VDHEFGKHALTFWKVL-ERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAH--- 175
           V    GK ALT ++V+ +  G    V+ T  TGR+HQ+RVHM  IGHPLLGD +Y H   
Sbjct: 224 VVSRGGKRALTHYRVVGDVEGIASIVKCTLSTGRTHQVRVHMAHIGHPLLGDAVYGHRNI 283

Query: 176 --------EQALAAWPRLCLHASMLSFTHPQSGERLRFECPAP 210
                    + +A   R  LH+  L F HP++GE L F    P
Sbjct: 284 PKKLPGDLSERIARLTRQALHSFHLGFLHPRTGESLEFLSELP 326