Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 223 a.a., pseudouridine synthase (RefSeq) from Shewanella sp. ANA-3

 Score =  183 bits (465), Expect = 2e-51
 Identities = 99/209 (47%), Positives = 129/209 (61%), Gaps = 4/209 (1%)

Query: 6   IHILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIIL 65
           + + YQD  ++++NKP+ LLS PGRA    DC +TRLQ   YP+  +VHRLD  TSGI++
Sbjct: 14  LDLRYQDRDLIIINKPSGLLSNPGRAAHTFDCALTRLQRL-YPDTILVHRLDCATSGIMV 72

Query: 66  LARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDP---PTKPRHVVDH 122
            AR+     +L  QF DR+ EK Y A   G    D+G IDL +  DP   P +       
Sbjct: 73  FARNKKAESQLKTQFQDRQNEKVYIAEVMGGIAKDAGIIDLAIAPDPEHPPYQKTQTPGT 132

Query: 123 EFGKHALTFWKVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAW 182
              K ALT ++VLER  +   VELTP TGR+HQLRVHML++GHP+LGD  Y  ++ + A 
Sbjct: 133 AGAKSALTHYRVLERRENSTLVELTPQTGRTHQLRVHMLALGHPILGDEFYGDDEVIKAR 192

Query: 183 PRLCLHASMLSFTHPQSGERLRFECPAPF 211
           PRLCLHA  L FTHP SG+ + F    PF
Sbjct: 193 PRLCLHAQSLRFTHPYSGKAMHFYSKHPF 221