Pairwise Alignments

Query, 211 a.a., pseudouridine synthase from Pseudomonas simiae WCS417

Subject, 225 a.a., ribosomal large subunit pseudouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score =  199 bits (505), Expect = 4e-56
 Identities = 103/206 (50%), Positives = 135/206 (65%), Gaps = 1/206 (0%)

Query: 6   IHILYQDDAVLVVNKPTLLLSVPGRADDNKDCLITRLQENGYPEARIVHRLDWETSGIIL 65
           + +LYQD  ++VVNKP+ LLSVPGR   + D +  R++   +P  +IVHRLD  TSG+I+
Sbjct: 14  LDVLYQDKDIIVVNKPSGLLSVPGRDPAHYDSVYARVKAE-HPHCQIVHRLDMATSGVIV 72

Query: 66  LARDADTHRELSRQFHDRETEKAYTALAWGQPELDSGSIDLPLRYDPPTKPRHVVDHEFG 125
           +A      REL RQFHDRET K Y A   G  +  +GS+D PL  D P +P+  VDHE G
Sbjct: 73  VALIRSAERELKRQFHDRETSKTYLARVAGHVKNTTGSVDYPLICDWPNRPKQKVDHEIG 132

Query: 126 KHALTFWKVLERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDGLYAHEQALAAWPRL 185
           K +LT ++VL R      V+L PITGRSHQLRVHM+++GHP+LGDG YA   A +  PRL
Sbjct: 133 KPSLTHFEVLSRAKRSTLVKLKPITGRSHQLRVHMMALGHPILGDGFYADPLAKSLAPRL 192

Query: 186 CLHASMLSFTHPQSGERLRFECPAPF 211
            LHA+ L+  HP +GE + F   A F
Sbjct: 193 LLHAAELTIKHPYTGESMTFSANASF 218