Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas simiae WCS417

Subject, 1155 a.a., transcription-repair coupling factor from Vibrio cholerae E7946 ATCC 55056

 Score = 66.6 bits (161), Expect = 7e-15
 Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 15/155 (9%)

Query: 225 LLAGVTGSGKTEVYLQLIRETLQAGKQALVLIPEINLGPQTLARFEQRF---NARIALVH 281
           L+ G  G GKTEV ++        GKQ  VL+P   L  Q    F  RF     R+ ++ 
Sbjct: 630 LVCGDVGFGKTEVAMRAAFVATDNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLS 689

Query: 282 SAVNDRERLESWLAARDGEADIIIGTRSALFTPMK--NPGLIIIDEEHDGSYKQQEGLRY 339
              + +E+ +      DG+ DI++GT   L + ++  + GL+I+DEEH          R+
Sbjct: 690 RFKSAKEQKQILQDVADGKVDILVGTHKLLSSEIRFADLGLLIVDEEH----------RF 739

Query: 340 HARDLALVRARQEDIPIVLGSATPSLESLHNAYTG 374
             R    V+A + D+ I+  +ATP   +L+ A +G
Sbjct: 740 GVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSG 774