Pairwise Alignments

Query, 739 a.a., primosomal protein N' from Pseudomonas simiae WCS417

Subject, 737 a.a., primosomal protein N' (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  658 bits (1698), Expect = 0.0
 Identities = 357/745 (47%), Positives = 477/745 (64%), Gaps = 25/745 (3%)

Query: 6   LRLALPSPLRRLFDYRAPAGVL-----RAQLQPGMRVRAPFGRREMIGILVEVADHSEVP 60
           + +ALP P+R+ F YR           +A+ Q G+RV+ PFGR+++IG++  + D  ++ 
Sbjct: 5   VEVALPVPMRQNFTYRVKTNEQNDDSPQAKPQIGVRVKVPFGRQQLIGLVTAITDSCDLA 64

Query: 61  AEKLKPALAMLDATPPLPPALFKLCLWTAQYYQHSLGDTLSWALPVLLRQGELAEARQER 120
             +LK  +  +D  P LP +L+KL LW A+YY  S G  L+ ALPV LR+G  A  ++ +
Sbjct: 65  PTQLKSVIEFIDDAPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQ 124

Query: 121 FWSMVP-GARLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKGLV 179
           +W +   G+ +    + RAP Q++ L  L Q    +  + +  L L+K +L  L  KG  
Sbjct: 125 YWQITTIGSNIAPETLKRAPAQKKLLEHLKQT--SLTQEEVISLELNKTALKTLEEKGW- 181

Query: 180 QVEIRKHAPDAR-HEHWLAQPELP-----LNPEQRAAYEAIRAGFDSFHAFLLAGVTGSG 233
              I +H   A+ +  W +Q EL      LN EQ  A   +      +H  LL G+TGSG
Sbjct: 182 ---IAQHEKIAQLNLDWRSQLELDETPHRLNKEQAVAVTVLTQQ-QGYHCTLLEGITGSG 237

Query: 234 KTEVYLQLIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESW 293
           KTEVYL L+   L+ GKQAL+L+PEI L PQT+ RF++RF   +A++HS + D +RLE+W
Sbjct: 238 KTEVYLALLEHILKQGKQALILVPEIGLTPQTINRFKRRFRVNVAVLHSGLTDNQRLEAW 297

Query: 294 LAARDGEADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQED 353
             AR G+A IIIGTRSALFTPM  PG+II+DEEHD S+KQQEG+ YHARDLA++R   E 
Sbjct: 298 RQARCGQAAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLES 357

Query: 354 IPIVLGSATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQ 413
           IP+VLGSATPSLESL NA +GRY  L+L ERAG AK+ R   +D+K+ PL +G+S P+  
Sbjct: 358 IPVVLGSATPSLESLQNALSGRYHHLQLGERAGNAKKVRQGIIDIKNLPLKAGMSAPLIN 417

Query: 414 AIGQTLAAGQQVLVFLNRRGFAPTLLCHDCGWMSECERCDARMTVHQRYGELRCHHCGHV 473
            I   L AG QVL+FLNRRGFAP LLCH+CG + EC+RCDA  TVHQ  GE+RCHHCG+ 
Sbjct: 418 EIRSHLDAGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNQ 477

Query: 474 ERVPRHCPQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQ 533
             +PR C  CG   L   G GTE+  E L + FP YPV+R+DRD+T  K ++    + I 
Sbjct: 478 YAIPRQCHNCGSTMLMGQGIGTEQLAEALQLEFPKYPVVRIDRDTTRLKGSLESHLSAIH 537

Query: 534 KGHPCILIGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAE 593
           KG   IL+GTQMLAKGHHFP VTLV +LD DG LFS DFRA ER  QL  QVAGRAGRA 
Sbjct: 538 KGEYKILVGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRAN 597

Query: 594 EPGRVIIQTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFSHLALLRAEAHKPGQA 653
           + G V++QTH +D+P+L  L  +GY  FA   L ER+ A LPP  H+ L+RAEAH    A
Sbjct: 598 KLGTVLLQTHQSDNPILRDLLHRGYGEFARSQLKERQMALLPPAWHMVLVRAEAHSALDA 657

Query: 654 EGFLDEACSAAERLLGELGLSGIELLGPVPAPMERRAGRYRAQLLLQATSRAPLHRLLSS 713
           + FL+   S   +          E++GP+PAP++R+AG++R QL+ QA  R  L +    
Sbjct: 658 DNFLNSFASLLPQ------DKEFEIIGPMPAPLDRKAGKFRRQLMFQAKHRHRLQQEFER 711

Query: 714 WLLALEQMPSGRQVRWSLDVDPVDL 738
               +EQ+P  ++ RWSLD DP DL
Sbjct: 712 IYPLVEQLPEAKRCRWSLDRDPQDL 736