Pairwise Alignments

Query, 578 a.a., arginyl-tRNA synthetase from Pseudomonas simiae WCS417

Subject, 566 a.a., arginine--tRNA ligase from Methanococcus maripaludis S2

 Score =  140 bits (352), Expect = 2e-37
 Identities = 126/546 (23%), Positives = 249/546 (45%), Gaps = 23/546 (4%)

Query: 41  GDFASNIAMMLSKPAGMKPRDLAEKIIAALPVDESVSKAEIAGPGFINFFQNTQALASRL 100
           GD+++NI+  L+K     P+ +AE I  +L +   + + E    G+INFF N    +   
Sbjct: 36  GDYSTNISFRLAKDLKKAPKMIAEDIANSLSI-LGIERIEAVN-GYINFFMNYSDFSKET 93

Query: 101 DAALADAKIGVHKAGPL-QRVVIDLSAPNLAKEMHVGHLRSTIIGDGVARVLEYLGDTVI 159
            + ++D K    K     ++V+++ ++ N     H+GH R+ +IGD + R+L   G  V 
Sbjct: 94  VSKISDEKENFGKLEKRNEKVILEHTSANPNGPFHIGHGRNMVIGDSLKRILIASGYDVE 153

Query: 160 RQNHVGDWGTQFGMLMAYLQENPITSNELSD--LENFYRAAKKRFDESEEFAERARGLVV 217
            Q +V D G Q  +++   ++  + +++ +D  +   Y    K   E+EE  +    L+ 
Sbjct: 154 TQYYVNDMGRQEAIVVFGNEKFELDNSKKADHAIGEVYVETNKLLAENEELEQEILNLMK 213

Query: 218 KLQAG-----DKECLALWNRFREISLSHCQEIYELLNVKLTMADVMGESAYNDDLINVVN 272
             ++      + E    +      SL   +E    LN+         E   +  +  V+N
Sbjct: 214 NYESACEAGIENELTEKFKNAVNYSLGGFKETLLTLNIYHDKFVWESEFVKSGMVREVIN 273

Query: 273 DLKAKGLLVESNGAQCVFLEEFKTADGEPLPVIIVKADGGYLYATTDLAAVRYRSGVLKA 332
            L   G +VE    + + L ++    G    +++ + +G  LY+T D+A       + K 
Sbjct: 274 RLMNTGKVVEDEVYR-LDLSDY----GIEKKLVLARLNGTSLYSTRDIAY-----HITKM 323

Query: 333 DRALYFVDQRQALHFQQVFEVARRAGFVTHPMHMEHMGFGTMNGADGRPFKTRDGGTVKL 392
           +   + V+   A H      V +    + +    E + +  ++  +G    TR G  + +
Sbjct: 324 ENCDFAVNLLGADHKLTAVMVNKTLALLGYN-EAEVVFYEFISLPEGS-MSTRKGRFISM 381

Query: 393 IDLLTEAQERAYNLVKEKNPELAEADLRNIARVVGIGAVKYADLSKHRTSDYSFNFELML 452
            +L  EA+ RA   V+++    +E ++  IA+ + +GAV+Y  +         F ++  L
Sbjct: 382 DELFEEAKSRAAEEVRKRGVAQSEEEIEEIAKKIAVGAVRYNIVRIAPEKPMVFRWDEAL 441

Query: 453 NFEGNTAPYLLYAYTRVAGVFRKLGKDFSEVEGQINLEATHEQELAAKLAQFGEVLNSVG 512
           +FE    P + YA+ R + +   +    +E     ++   +E+ +   L++  +++    
Sbjct: 442 DFEKVGCPVIQYAHARCSRILENVENISNENLFAYDMNE-NEKTIVKLLSKLPKIVEKAA 500

Query: 513 EKGTPHILCTYLYEVAGLFSSFYENCPILTADDEAQKQSRLRLAALAGRTLKQGLELLGL 572
           E   P I+  Y+ +VA  F+ FY NCP+L  ++E  K SRL + +     L+  L+LLG+
Sbjct: 501 EVRKPQIVANYVLDVAQGFNKFYANCPVLKEENETVKNSRLAIVSTTKTVLENTLDLLGI 560

Query: 573 ETLERM 578
           E   +M
Sbjct: 561 EMPGKM 566