Pairwise Alignments

Query, 185 a.a., DNA mismatch repair protein MutS from Pseudomonas simiae WCS417

Subject, 186 a.a., endonuclease SmrB from Vibrio cholerae E7946 ATCC 55056

 Score = 84.3 bits (207), Expect = 1e-21
 Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 22/179 (12%)

Query: 3   DDDFSLFKNELRGVKPIKHD---RADTGKPKADRAQIAKLRQAATVRTEATTVDG---LS 56
           DDDFSLF++E++GVK ++ D    A    PK          Q    RTE    D     S
Sbjct: 19  DDDFSLFRDEVKGVKKLRQDTILHAPNRNPK----------QKEIRRTEREASDNDFYFS 68

Query: 57  DQFVIDVGPEDELMWARDGVQESQMRKLKAAQIPFEGSLDLHGMSVEKARETLWAFLAEA 116
           D+F+  +  E    +AR  V + ++++L+      +  LD+HGM+ ++A+  L A +A  
Sbjct: 69  DEFMPHLTDEGPTRYARSDVSKYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYC 128

Query: 117 TRFEIRCVRVTHGKAVRLDGKRPMIKSHVNTWLRQHAQVLGFTSCQARHGGAGAVYVML 175
            +  + C  V HG        + ++K +V  WL QH  VL F       GG GA+ V+L
Sbjct: 129 LKENVHCACVQHGIG------KHILKQNVPLWLAQHPDVLAFHQAPLEFGGDGALLVLL 181