Pairwise Alignments

Query, 695 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 657 a.a., LTA synthase family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  218 bits (555), Expect = 7e-61
 Identities = 172/628 (27%), Positives = 301/628 (47%), Gaps = 57/628 (9%)

Query: 27  YTLLCAL-VMMVMFSLLRLALLVYNREMILDTPASTFLEAFGNGTRLDIRFVMYALI--P 83
           Y ++CA+  ++V+F+L RL L +++ + +  T A  ++  F +G R+D   + Y  I   
Sbjct: 15  YPIVCAVFALLVIFALSRLGLAMWHFDRV--TNADGWIRIFTSGLRVDFASICYLFILPA 72

Query: 84  LLLALFSVRAMAAR---GFFRLWLTVVSSIALFLGLMEMDFYREFHQRLNGLVFQYVKED 140
           LL +L S      R      RLW+T    I +++ +    F  E+  R N L  +Y+   
Sbjct: 73  LLTSLISGEHWLGRIWNWILRLWITAGLWIVVYMEVATPPFIIEYDLRPNRLFVEYLIY- 131

Query: 141 PSTVMSMLWYGFPVVRYL-LAWAVGTLILSMAFTGADRATRPRGPFSGGSIGTRQVAPWY 199
           P  V  MLW G+ +  ++ L  +V T++L   +             S   +       WY
Sbjct: 132 PKEVFGMLWSGYKLELFIGLVVSVLTVVLGWRW-------------SKTLVSNLHYPKWY 178

Query: 200 TRIAVFVVCLLIAVVAIRGTLRQGPPLRWGDVYTTDSNFANQLGLNGTLSLIGAAKARFS 259
            R  + V+ + + V+  R +L   P +    V  +     N L LN   S+I AAK   S
Sbjct: 179 WRPVIAVLVVTVGVLGARSSLGHRP-MNPAMVSFSSDPLMNDLALNSAYSVIFAAKQMGS 237

Query: 260 EHRDNTWKATLEQPLATQTVRDMLVLPTEKLVDTDTAAVRREFTPPAEKTLPIKNVVVIL 319
           E     +   +++ L    VR  + +  E  +  D  ++         +  P KN+V++L
Sbjct: 238 EANAFEFYPKMDKQLVIDQVRASMTVAPEDFISDDKPSLANHVA--TYQGAP-KNIVILL 294

Query: 320 MESFAGHSVGALGRPGNITPYFDKLSKEGLLFDRFFSNGTHTHQGMFATMACFPNLPAFE 379
           MES     V +LG   +++P  DKL  EG  F R ++ GT + +G+ A    F   PA  
Sbjct: 295 MESHGARYVKSLGGI-DVSPNMDKLINEGWAFTRMYATGTRSVRGIEAVTTGFSPTPA-R 352

Query: 380 YLMQTPEGSHKLSGLPQLLSARKFDDVYVYNGDFAWDNQSGFFSNQGMTNFIGRNDFVDP 439
            +++  +  +    +  LL  +++   ++Y G+  +DN   FF   G   F+   D   P
Sbjct: 353 SVVKLGKSQNNFFSIAGLLKTQQYHTQFIYGGESHFDNMKSFFLGNG---FVDMQDL--P 407

Query: 440 VFSDP----TWGVSDQDMFNRGLEEL-KAREGGKPFYALLQTLSNHTPYALPTPLPVEKV 494
            FS+P    +WG SD+D+FN+  E+  +  + GKPF++L+ T SNH+P+  P  +  +  
Sbjct: 408 TFSNPKFVGSWGASDEDLFNKADEQFTQMAKEGKPFFSLVFTSSNHSPFEYPDGVITQYN 467

Query: 495 TGRGSLDEHLTAMRYSDWALGQFFEKARKEPYFKETLFVIVGDHGFGNEQQITEMDLGRF 554
             + +++    A++Y+D+ALGQF EKA+K PY+  T+FV+V DH     Q    + +  F
Sbjct: 468 EPKQTVEN---AVKYADYALGQFVEKAKKSPYWDNTVFVVVADHD-ARTQGTNPIPVEYF 523

Query: 555 NVPMLMIAPGIQEKFGERDHTVGTQIDIVPTIMGRLGGETLHQCWGRDLLN--------- 605
           ++P ++   GI+ +   +D  + +Q+D+ PT++   G  + +   G DL           
Sbjct: 524 HIPAVIFGGGIEAR---KDDRLLSQLDLAPTLLSLAGISSQNPMIGFDLTQDVPVEKQRA 580

Query: 606 LPEGDKGFGVIKPSGSDQTVALLTGDRV 633
           + + DK FG + P   +Q V L  G  +
Sbjct: 581 MMQRDKNFGWLTP--DNQVVVLQPGQDI 606