Pairwise Alignments

Query, 445 a.a., ATP-dependent protease ATP-binding subunit HslU from Pseudomonas simiae WCS417

Subject, 426 a.a., ATP-dependent Clp protease ATP-binding subunit ClpX from Vibrio cholerae E7946 ATCC 55056

 Score = 97.4 bits (241), Expect = 8e-25
 Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 16/148 (10%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPEELR--VEVTPKNILMIGPTGVG 61
           TPR+I   L+ ++IGQ+ AK+ +A+A+ N ++R++  +     VE+   NIL+IGPTG G
Sbjct: 67  TPRKIREHLDDYVIGQEHAKKVLAVAVYNHYKRLRNGDTTSEGVELGKSNILLIGPTGSG 126

Query: 62  KTEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIR--------DLADAALKLLREQ 113
           KT +A  LA+L + PF   +AT  TE GYVG DVE+II+        D+A A   ++   
Sbjct: 127 KTLLAETLARLLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVAKAERGIVYID 186

Query: 114 EMTKVSHRAE------DAAEERILDALL 135
           E+ K+S ++E      D + E +  ALL
Sbjct: 187 EIDKISRKSENPSITRDVSGEGVQQALL 214



 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 77/245 (31%), Positives = 108/245 (44%), Gaps = 62/245 (25%)

Query: 244 AVEQHGIVFIDEIDKVAKRGNSGGV--DVSREGVQRDLLPLIEGCTVNT----------- 290
           A  + GIV+IDEIDK++++  +  +  DVS EGVQ+ LL LIEG   +            
Sbjct: 176 AKAERGIVYIDEIDKISRKSENPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQ 235

Query: 291 KLGMVKTDHILFIASGAFH------------------------------LSK------PS 314
           +   V T  ILFI  GAF                               LS+      P 
Sbjct: 236 EFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGFGADVRSKDNSKTLSELFTQVEPE 295

Query: 315 DLV-----PELQGRLPIRVELKALTPGDFERILSEPHASLTEQYRELLKTEGLGIEFQAD 369
           DLV     PE  GRLP+   L  L      +IL EP  +LT+QY  L + E + +EF+ D
Sbjct: 296 DLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKNALTKQYAALFELENVDLEFRED 355

Query: 370 GIKRLAEIAWQVNEKTENIGARRLHTLLERLLEEVSFSAGDLAGAQNGEVIKIDAEYVNS 429
            +K +A  A  +  KT   GAR L ++LE +L E  +   +L   +    + ID   +N 
Sbjct: 356 ALKAIA--AKAMKRKT---GARGLRSILEAVLLETMY---ELPSMEEVSKVVIDESVING 407

Query: 430 HLGEL 434
               L
Sbjct: 408 ESAPL 412