Pairwise Alignments

Query, 445 a.a., ATP-dependent protease ATP-binding subunit HslU from Pseudomonas simiae WCS417

Subject, 425 a.a., ATP-dependent protease ATP-binding subunit ClpX from Sinorhizobium meliloti 1021

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 15/147 (10%)

Query: 4   TPREIVHELNRHIIGQDDAKRAVAIALRNRWRRM-QLPEELRVEVTPKNILMIGPTGVGK 62
           TP+EI+  L+ ++IGQ  AKR +++A+ N ++R+    +   VE+   NI+++GPTG GK
Sbjct: 68  TPQEIIKVLDEYVIGQQQAKRILSVAVHNHYKRLAHAAKSSDVELAKSNIMLVGPTGCGK 127

Query: 63  TEIARRLAKLANAPFIKVEATKFTEVGYVGRDVESIIRDLADAA-LKLLREQ-------E 114
           T +A+ LA++ + PF   +AT  TE GYVG DVE+II  L  AA   + R Q       E
Sbjct: 128 TYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDE 187

Query: 115 MTKVSHRAE------DAAEERILDALL 135
           + K+S +++      D + E +  ALL
Sbjct: 188 VDKISRKSDNPSITRDVSGEGVQQALL 214



 Score = 85.9 bits (211), Expect = 2e-21
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 70/276 (25%)

Query: 227 EAGRLVNE-EELKAKALEAVE------QHGIVFIDEIDKVAKRGNSGGV--DVSREGVQR 277
           EAG +  + E +  K L+A +      Q GIV+IDE+DK++++ ++  +  DVS EGVQ+
Sbjct: 152 EAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQ 211

Query: 278 DLLPLIEGCTVNT-----------KLGMVKTDHILFIASGAFH----------------- 309
            LL ++EG   +            +   V T +ILFI  GAF                  
Sbjct: 212 ALLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIISARGEKTSIGF 271

Query: 310 ---LSKPSD-------------------LVPELQGRLPIRVELKALTPGDFERILSEPHA 347
              +  P D                   L+PE  GRLP+   L+ L      +ILSEP  
Sbjct: 272 GATVRAPEDRRVGEVLRELEPEDLVKFGLIPEFIGRLPVLATLEDLDEDALIQILSEPKN 331

Query: 348 SLTEQYRELLKTEGLGIEFQADGIKRLAEIAWQVNEKTENIGARRLHTLLERLLEEVSFS 407
           +L +QY+ L + E + + F  D ++ +A  A  +  KT   GAR L +++E++L +  F 
Sbjct: 332 ALVKQYQRLFEMEDVELNFHEDALREIARRA--IVRKT---GARGLRSIMEKILLDTMFE 386

Query: 408 AGDLAGAQ----NGEVIKIDAE--YVNSHLGELAQN 437
              L G +    + EV+K  A   Y+ S   E   N
Sbjct: 387 LPTLEGVREVVISDEVVKGTARPLYIYSERSEEKTN 422