Pairwise Alignments

Query, 666 a.a., FAD-dependent cmnm(5)s(2)U34 oxidoreductase from Pseudomonas simiae WCS417

Subject, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

 Score =  400 bits (1028), Expect = e-115
 Identities = 263/687 (38%), Positives = 364/687 (52%), Gaps = 41/687 (5%)

Query: 1   MNPVTHAQLDWDDQGRPRSRVFDDVYFSDKSGLEETRYVFLEQNRLQERFAALPVGGRLV 60
           M+ ++HAQL W+D G P S  FDDVYFS+ +GL ETRYVFLEQN L +R+       R V
Sbjct: 4   MSSISHAQLGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHN-DDQRRFV 62

Query: 61  IGETGFGTGLNFLCAWQLFEQHAVAGA-----HLHFVSVEKYPLSRADLQRALALWPELQ 115
           I ETGFGTGLNFL  WQ F     A        LHF+S EKYPLS++DL +A   WPEL 
Sbjct: 63  IAETGFGTGLNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELA 122

Query: 116 PLAAQLLAQYIAIHQGFQRLVLDNGRVTLTLLIGDALEQLPQLDAQ----VDAWFLDGFA 171
             A +L   Y       QR+VL++G VTL L  GD  + LP++  Q    VDAWFLDGFA
Sbjct: 123 QFAQKLHKHYPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFA 182

Query: 172 PAKNPEMWTAELFAELARLAAPGSTISTFTSTGWVRRLINAAGFKMKRTPGIGHKWEILR 231
           P+KNPEMW   LFA +A+LA  G T +TFTS G+VRR +  AGF MK+  G G K E++ 
Sbjct: 183 PSKNPEMWNQNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIA 242

Query: 232 GEFLGWPADAPAPSAAKPWFARPAALAGERHALVIGGGLAGCATASSLAARGWQVSLLER 291
           G         P  + A  +  R  A  G +   +IGGG+A    A++LA RG  V+L   
Sbjct: 243 GSL---SEKVPYTNIAPEF--RFEATHGLQEVAIIGGGIASATLATTLARRGVAVTLYCA 297

Query: 292 HASLAQEASGNPQGVLYLKLSAHGTALSQLIVAGFGHTRRLLEHLHRGV--DWDGCGVLQ 349
               AQ ASGN QG +Y  LS    A+S++    F   R+ +E     +  D D CGV Q
Sbjct: 298 DEKPAQGASGNRQGAVYPLLSGDHNAVSRVFAPAFLFARQWIEQAAEQINFDHDWCGVTQ 357

Query: 350 LAFNAKEAER-QAQLAHAFAPDLLHLLDRDQAQQQAGIRLAQGGLFFPEGGWVHPPALCQ 408
           L ++ K  ++ ++ L   F   L+H L  +Q  QQ G+ + +  + +P GGW+ P  L Q
Sbjct: 358 LMWDEKATDKLKSMLEGNFPTQLVHGLSAEQTNQQVGVPVDKASVHYPLGGWLSPAELTQ 417

Query: 409 W--QAAHPLIKVLTHH----EALELHRVDDQWQARDGDRVLASATVVVLAGAADIKRFAL 462
                     K+  H+    +AL        WQ R GD  L S   VV+A        + 
Sbjct: 418 GLIHLLEQQGKLTAHYQTPIDALTWQPETQLWQLRSGD-TLMSHQCVVIASGHQFDSLSQ 476

Query: 463 SADLPLKRIRGQITRLAQTTASAALATVVCAEGYVAPA--RRGEHTLGASFDFNNDDLT- 519
           +A+LPL +++GQ++ +  T   + + +V+C +GY+ P   + G H +GAS+D  + D T 
Sbjct: 477 TAELPLGKVKGQVSHIPTTETLSKINSVLCYDGYMTPVSQQNGYHCIGASYDRQHLDATF 536

Query: 520 PTVAEHAGNLAMLREISED---LVQRLGANQLVPEQLEGRAAFRCTSPDYLPIVGPLADT 576
              A+H     ++  + E    L   +  NQ        R   RC S D+LP VG + + 
Sbjct: 537 DPQAQHENAQKLIHCLPEQTWPLEVDVSGNQ-------SRQGVRCVSRDHLPFVGNVGEF 589

Query: 577 EAFQRTYAVLSKDARQVPDMPCPWLPGVYINSGHGSRGLITAPLCGELLAAWLNDEPLPV 636
                 Y  L   A+Q    P    P +Y   G GSRGL +APL  ELLA+ +  +P+P+
Sbjct: 590 SKITEQYRDL---AQQHQAEPIALYPQLYALVGLGSRGLSSAPLMAELLASQMCGDPMPL 646

Query: 637 PASVAEACHPNRFALRALVRGKSTVNK 663
              + E  HP+R  +R L +GK+   K
Sbjct: 647 GVDLLEQLHPSRMWVRKLRKGKALTQK 673