Pairwise Alignments

Query, 1614 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 447 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 4e-11
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 10/178 (5%)

Query: 1125 IGSLPTLPPEI--RFDHVEQLSLKNMQLGDDVAYFLKCFKGLRRLDLDRNRLTRLPEILS 1182
            + +L   P EI    D +E L L N QL   +   L     L+ L    NR   LPE+L 
Sbjct: 21   VENLTEFPREIFDLADTLEILDLSNNQLSS-LPEDLHRLTHLKILFASNNRFETLPEVLG 79

Query: 1183 RMLALDSLSMPRNRLALTEYTRVKLADMSTLRRLDLSHNPLEKLVD-VGKMRDLHTLLLQ 1241
            +   L+ +    N++       +     +  R L L+ N +  L + +G+++ L  L L 
Sbjct: 80   QCPKLEMIGFKANQIRTVPAASLP----AQTRWLILTDNQITTLPERMGQLQRLQKLALA 135

Query: 1242 DTKITDLPVGLGRLAQLEQMDLRGNSITVLPEWVFTTPRSFSQSVNLGGNPLSRSTVE 1299
              ++T LP  +     LE + L  NS+  LP W+   P+     +   GNP S + V+
Sbjct: 136  GNRLTALPASMAHCRNLELIRLSANSLEKLPSWLLRLPK--LTWLAFAGNPFSHTLVD 191