Pairwise Alignments

Query, 318 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 60.8 bits (146), Expect = 4e-14
 Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 31/296 (10%)

Query: 11  GFLLTLLTALLWGILPIKLKQVLQVMDPITVTWFRLIVAGSCLFVYLALTKRLPRRSVLG 70
           G LL  LT + WGI  +  K +L+ + PIT+ + R+++A   L  ++    +  +   + 
Sbjct: 7   GILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYSKEDFV- 65

Query: 71  PKGGWLVGMAVCGLVGNYVLYLVGLKRLSPGTAQLVVQMGPIFLMIASVFVFKERFSR-- 128
               ++V     G+   Y+   V LK  +   A L+    PIF +I S  V K+  S+  
Sbjct: 66  ----YIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPSKIK 121

Query: 129 --GQVLGLFVLIAGFGLFFNQRLEELLTSLGAYTAGVLTILLATSIWVFYALGQKQLLTV 186
             G ++GLF +   F L  N +    L  LG      + +  A   WV Y     Q L  
Sbjct: 122 YFGSLIGLFGV---FILILNGKFVLELNPLGD-----ILMFGAVCTWVLYTF-VIQKLQK 172

Query: 187 WNSLQVMMVIYLTCALLLTPWAHPLEALDLSPLQAWLLLACCMNTLVAY-----GAFAEA 241
            + L+V   I L  A+   P+   +  L  + +  + +L   +N  +A+       F  A
Sbjct: 173 HDDLKVTRDITLIGAVFFIPFT--IMELGYNGMFEFTIL---LNPYIAFSLLYLAIFCSA 227

Query: 242 LAH--WEASRVSATLALTPLVTFVAVALAAWLWPAYVQAEEINALGYAGALVVVLG 295
           +A+  W  +   A  + T    ++ + + A +  A +     N     GA++V+ G
Sbjct: 228 IAYLFWNMAIRLAGASTTTNGVYI-IPIVAMITDAIILKNIPNIYAIIGAVLVLFG 282