Pairwise Alignments

Query, 820 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  217 bits (553), Expect = 3e-60
 Identities = 175/566 (30%), Positives = 264/566 (46%), Gaps = 33/566 (5%)

Query: 241  QQEKERAQITLESIGDGVITTDVDGAITYMNPAAEALTHWNSAQAQGLPLAALFNLLDDN 300
            +++   A    E     ++ TD  G I   N A   ++ +  +Q     L  L N+L  +
Sbjct: 694  EKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQV----LDQLPNMLTVD 749

Query: 301  AQPDGFTLIEHIVKGQLSGGS--EHSKTIQRLDGSTVSVTL-VGAPIRSTGKVTGAVLVL 357
             Q +    + +++K QL   S  E    ++R +G      + + A +   G +   V   
Sbjct: 750  EQQEAH--LRYVLK-QLQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFF 806

Query: 358  HDMTQERQYIANLSWQATHDALTGLANRREFEFRLEQVLHPTAQQNGGRHALMFLDLDQF 417
             D+++ +     +   A +DALT L NR  F+ RL   L    +Q      LMFLDLD+F
Sbjct: 807  SDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSADRQKTWV-VLMFLDLDRF 865

Query: 418  KLVNDTCGHAAGDELLRHICALLQSDLREGDTLARLGGDEFGILLE---------NCPAA 468
            K +ND+ GHAAGD +L+ +   L   + + DT+AR+GGDEF +LL+         N    
Sbjct: 866  KPINDSLGHAAGDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAIN 925

Query: 469  VAEKIAESLRHTVQNLHFVWKGRPFMTTVSIGLVHLGHTPTTLETSLRAADMACYMAKEK 528
            VAE+I  SL        FV +GR F  T SIG+         L   ++ AD A Y AKE+
Sbjct: 926  VAEQILASLVRP-----FVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKER 980

Query: 529  GRNRVQVYHADDSELSLRFGEMAWVQRLHMALEENRFCLYAQ-EISPLGQTNGGDGHIEI 587
            G+N  Q Y AD +  +L   E+     L  ALE+N F LY Q + S  G+   G    E 
Sbjct: 981  GKNNFQFYQADMNASALERLELE--SDLRHALEQNEFVLYYQPQFSGDGKRLTG---AEA 1035

Query: 588  LLRLHDEAGRIILPDSFIPAAERYGLMTSLDRWVVENVFKIINRCMQERPGLPMAMCAIN 647
            LLR       ++ P  FIP  E  GL+  +  WV+    + +    Q +  +P    ++N
Sbjct: 1036 LLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVITEACRQLRTWHQAKVRVPKV--SVN 1093

Query: 648  LSGITIGDDDFLGFLREKFHTYTIPPGMICFEITETSAIANLGSAIRFINELKALGCHFS 707
            +S     D      +     +  +PP  +  E+TE+  +  +  A++ +  LK LG   +
Sbjct: 1094 ISARQFSDGQLGTRIANILRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIA 1153

Query: 708  LDDFCAGMSSFAYLKHLPVDFLKIDGSFVKDMLDDPINRAMVEVINHIGHVMGKRTIAEF 767
            +DDF  G SS  YLK  P+D LKID +FV  +     +  +   I  + H +    IAE 
Sbjct: 1154 VDDFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEG 1213

Query: 768  VETPQIEQALLEIGVDYAQGYLIERP 793
            VET +    L E G D  QGYL  RP
Sbjct: 1214 VETHEQLDFLREHGCDEVQGYLFGRP 1239



 Score = 37.0 bits (84), Expect = 7e-06
 Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 20/171 (11%)

Query: 220 VLALLRTHKLLTQRHAFADALQQEKERAQITLESIGDGVITTDVDGAITYMNPAAEAL-- 277
           V  ++   K +T++   +++L+  ++R ++  ESI D + +TD   ++ Y++P+ +A+  
Sbjct: 537 VTRIIGVAKDVTEQIEASESLRDSEQRYRMLAESISDVIFSTDNKLSLNYVSPSVQAVLG 596

Query: 278 --------THWNSAQAQGLPLAALFNLLDDNA----QPDGFTLIEHIVKGQLSGGSEHSK 325
                     W S  A    L  +++L+D  +    +PD    + + ++ QL        
Sbjct: 597 YTADWIFQNGWQSIIANPQQLTGIYSLMDRVSKALDKPDQLAELRNQMQTQL-----FLF 651

Query: 326 TIQRLDGSTVSVTLVGAPI-RSTGKVTGAVLVLHDMTQERQYIANLSWQAT 375
              R DG  + + L    +    G   G + V  D++Q+R+   +L   AT
Sbjct: 652 DCLRADGRKIPIELRLVLVWDEHGAFEGVLGVGRDISQQRRAEKDLRMAAT 702