Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 295 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  167 bits (424), Expect = 2e-46
 Identities = 100/293 (34%), Positives = 165/293 (56%), Gaps = 6/293 (2%)

Query: 3   LRTLRAFVEVVRQGGFSQAAEVVSLTQSSVSKAVKTLEDELGTPLLNRLGHRNELTAAGE 62
           ++TL+ F+ +V    F++AAE   +TQ ++SK ++ LE+ LG  LL R   + ELT AG+
Sbjct: 5   IKTLQCFLTLVETENFTRAAEKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELTQAGQ 64

Query: 63  IAYRRALVLLAERNDLVAEINDLRGLKRGVLRIGLPPVGCGVLFATMFATYRSRYPDIDI 122
           +    A  +L + + L  ++++L GLK G LR+G+ P+   ++   +  +YR RYP +++
Sbjct: 65  LFEHSAREILGQWHRLQEDMSNLSGLKTGRLRLGVCPMMSSLIIG-LLTSYRKRYPGVEL 123

Query: 123 ELTEYGSKKLRECLEAGEVDLAALLLPVDEDFDY--QPVRNEPLMAVLPMSHPLAHLKRI 180
           ++ EYG     + L    +D+A   LP   + +   QP+   PL+A LP  HPLA    +
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHETELVNQPLTKYPLLACLPDGHPLASQSHL 183

Query: 181 DFTHLADSPFILFEAGFALNAKILAACERK-GVTPKVTARSGQIDFIIDLVAAGLGVAFV 239
            +      PFIL+   F+L AK++    RK GV   +  RSGQ DF+  +V A +G+A +
Sbjct: 184 SWQDFEPYPFILYNEDFSL-AKLINRLSRKAGVQLNIAFRSGQWDFLAAMVEADMGLAIL 242

Query: 240 PRMLAYKHQHAGIALIPLDEPHTDWHIALAWRTSAHLPPAALAWLELAREHAV 292
           P  +  K   + +   P+ +P   W +AL WR +  L PAA A LEL+++ A+
Sbjct: 243 PEPICQKLSTSKLVFRPM-QPAMTWDLALIWRQNLPLTPAANALLELSKQKAL 294