Pairwise Alignments

Query, 405 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 405 a.a., Arabinose efflux permease from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (389), Expect = 4e-42
 Identities = 107/377 (28%), Positives = 193/377 (51%), Gaps = 6/377 (1%)

Query: 10  SSDRLPIGALLALAMTGFICIVTETLPAGLLPLISEGLAISPSMAGQ-MVTAYALGSVLA 68
           S D    GA+LA+++  F+ + +E +P  LL  ++  L +S   AGQ +  + A   + +
Sbjct: 7   SQDPPAWGAVLAMSLAAFVLVASEFMPVSLLTPVAADLHVSEGQAGQGIAVSGAFALITS 66

Query: 69  VIPMTIATRGWRRRNVLLLTIVGFLLFNSITAWSSHYGVTLVARFFAGVAAGLAWSLLAG 128
           +   +IA +  R+  +L LT++  ++  ++ A++ +Y V ++ R   GVA G  WSL A 
Sbjct: 67  LFIASIAAQVDRKWLLLGLTLL-MIVSGTVVAFAPNYPVFMLGRALIGVAIGGFWSLSAA 125

Query: 129 YARRMVAPHQQGRALALAMVGTPIALSLGVPLGTWLGGLVGWRTTFGLMSAVSLVLIVWV 188
            A R+V   Q  +ALA+   G  +A  +  PLG++LG ++GWR  F  +  V+ + +VW+
Sbjct: 126 TAMRLVPDDQVPQALAIVNGGNALATVVAAPLGSFLGAIIGWRGAFFCIVPVAAIALVWL 185

Query: 189 LVKVPDYAPQPTHQRLSLGKVLTTPGVRPVLAVVISWMLAHNILYTYIAPFVAPAG--LA 246
           L+++P    Q      ++ K++T   V   +  V ++ +   +L+TY+ PF+        
Sbjct: 186 LLRLPSMPSQAKRGGTNVFKLMTRAPVALGMLAVSTFFMGQFMLFTYLRPFLETVTQVSV 245

Query: 247 DRVDLVLLVFGVAALAGIWLTAKWVEPLLRRTVLVSLVAFAAMS-AVFGLLGNVPVVIYF 305
             +  +LLV GVA L G +L    ++  L RT++V  +  AA++ A+ G  G++ +  + 
Sbjct: 246 SMLSFMLLVIGVAGLLGTFLIGVCLKNNLYRTLIVIPLLMAAIAIALVGFGGSITIATFL 305

Query: 306 GVAVWGLSFGGAATLLQTALADAAGDGADVALSLNVVAWNSAIAGSGVVGGVLLDTWGVA 365
            + +WGL    A     T L+    + A+    L V     AIA    VGG+L D  G  
Sbjct: 306 -LGLWGLVATAAPVGWWTWLSRTLPEDAEAGGGLMVAIVQLAIAAGATVGGLLFDLSGYC 364

Query: 366 SFPWAMLVLIGVSLAIA 382
           +       ++GV+  +A
Sbjct: 365 ATFETSAAVLGVAAVLA 381