Pairwise Alignments

Query, 324 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 304 a.a., transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  124 bits (312), Expect = 2e-33
 Identities = 83/304 (27%), Positives = 145/304 (47%), Gaps = 9/304 (2%)

Query: 4   RITQRQLEYFVASGEAGSISAAAERIHVSSPSISAAITHMEAELGIQLFIRHHAQGISLT 63
           R T RQL Y   +   G I+ AA +++VS+ +I++A+  +EA  G+ LF R  AQG+ LT
Sbjct: 3   RFTLRQLTYLTETARQGGIAQAARQLNVSAAAIASALDKLEAATGLTLFDRFPAQGMRLT 62

Query: 64  AVGRLVMQEAKLILEQMTNLYTIASESLNTVRGPLRVGCLESLAPMITPELVFGFGRAFP 123
             G     +A+ +L Q + L   A++  +   G + +G   +LA  I    V  F    P
Sbjct: 63  RAGETFATQAEALLVQASALDRRAADLASGRAGRIHIGTHHALAQQIVLPAVLAFRENHP 122

Query: 124 GVRLTQAEGNHEELLEKLRSGELDIALTYDL-VTSADIDFQPLAQLPPYVMVGEYHPLAN 182
           GVR+   E ++  L++ L        + +D        + + L +LPP V++   HPLA 
Sbjct: 123 GVRVEVKEADYPALVDAL--------VVFDQGFDPGRHEVEVLLELPPLVLLSGSHPLAA 174

Query: 183 SPAVSMQDLEAYPVVLLDTPWSRDYFLSLFIQAGTTPNIIMRSTNLETVRAMVGNGIGYS 242
              +S+ DL   P + +        +L L   AG  P +  +S + E V+A VG G G++
Sbjct: 175 KSRISLSDLTGLPYISVSPAGPGPSYLQLLQAAGVHPEVPFQSQSRELVQAYVGKGFGFT 234

Query: 243 FANARPKSNLSQDGKRVIRLRLAGAHRPMRLGYATASNTQLSRVVSAFAERCRMFVSDQY 302
            A   PK + + +G  ++   L  +    R+  A +     + ++  F + C+  +S   
Sbjct: 235 LAGFPPKQDCTTEGDPIVARPLKESIGHYRVVIARSRQAVQTALIDRFLQVCKSPISVSG 294

Query: 303 IPGM 306
           + G+
Sbjct: 295 LAGI 298