Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (371), Expect = 3e-40
 Identities = 100/303 (33%), Positives = 148/303 (48%), Gaps = 11/303 (3%)

Query: 1   MSRDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRGL 60
           MSR LPPLN+L+ FEA AR  S ++AAE+L VT  AVS Q+K LEE LG+ LF +  R L
Sbjct: 1   MSRRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSL 60

Query: 61  KLTDAGVRLRDASAEAFERLRDVCAELTQASADAPFVLGCSGSLLARWLIPRLGRLNADL 120
            LT+ G        + F  L +   +L + S      +    S   +WL+PRL   N   
Sbjct: 61  LLTEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQE 120

Query: 121 PDLRLHLSAGDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVMSPRFAGYAHL 180
           PD+ + + A D D       +D  + +    WP  ++  +L  E + P+ SP       L
Sbjct: 121 PDIDVRIKAVDMDEGSLTDDVDVAIYYGRGSWPG-LRADKLYQEFLIPLCSPALL----L 175

Query: 181 RDAPAEALCG---EKLLHTTSRPQAWPSWAAQHGIEPGALKHGQGFEHLYYLLEAAVAGL 237
            + P E L       LLH TSR + W  +A ++G++   + HG  F H   +L+AA  G 
Sbjct: 176 GNKPMEKLSDLAYHTLLHDTSR-KDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQ 234

Query: 238 GVAIAPQPLVAEDVRAGRLVAPWG--FSETPAQLALWLPKRAADGRAGQLAQWLKAELQR 295
           GVA+    L   ++ AGRL+AP+        A   +   K+A  GR      W+  + + 
Sbjct: 235 GVALGNNVLAQPEIDAGRLIAPFDEVLMTNNAFYVVCHEKQADMGRIATFRDWMLKKARS 294

Query: 296 EPI 298
           E +
Sbjct: 295 EQV 297