Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 320 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  138 bits (348), Expect = 1e-37
 Identities = 93/263 (35%), Positives = 139/263 (52%), Gaps = 11/263 (4%)

Query: 1   MSRDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRGL 60
           M   LPPLNALRAFE+ ARL S++ A+++LHVTHGA+S+Q++VLEE LG +LFV+  + +
Sbjct: 19  MFTSLPPLNALRAFESAARLQSMTLASKELHVTHGAISKQIRVLEEFLGFALFVRLHKKV 78

Query: 61  KLTDAGVRLRDASAEAFERLRDVCAEL-TQASADAPFVLGCSGSLLARWLIPRLGRLNAD 119
            LT+   R       A + L    A+L +Q S      +    SL   WLIPR+ +  + 
Sbjct: 79  ALTNEAKRYLPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSR 138

Query: 120 LPDLRLHLSAGDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVMSPRFAGYAH 179
            P L + LS GD  +D  +   D + + +    P  +   +L  E +  V +P  A    
Sbjct: 139 HPHLYVDLSIGDFAVDFSQGRYD-IAIRSSTQLPRGVNYIKLMDEDLCLVCAPSLAP--- 194

Query: 180 LRDAPAEALCGEKLLHTTSRPQAWPSWAAQHGIEPGALKHGQ--GFEHLYYLLEAAVAGL 237
            +    E +    LL  T+RP+ W  WA + G+    L   Q  G EH Y L +AA +G+
Sbjct: 195 -KLKSIEDINQVTLLKHTTRPELWEYWADKVGL---VLTQAQTFGVEHFYMLSQAAASGM 250

Query: 238 GVAIAPQPLVAEDVRAGRLVAPW 260
           G A+ P+  + E +  G LV P+
Sbjct: 251 GAALIPRFFIEEQLANGSLVIPF 273