Pairwise Alignments

Query, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 288 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (394), Expect = 6e-43
 Identities = 98/255 (38%), Positives = 138/255 (54%), Gaps = 9/255 (3%)

Query: 8   LNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKVLEEHLGISLFVKDGRGLKLTDAGV 67
           L A   F  TA  +S SQAAE+LH+THGAVS+Q+K+LE HL   LF K GRG+ LT  G 
Sbjct: 4   LKAFYVFHITAESSSYSQAAEKLHITHGAVSKQIKLLENHLSQILFYKQGRGMCLTQEGE 63

Query: 68  RLRDASAEAFERLRDVCAELTQASADAPFVLGCSGSLLARWLIPRLGRLNADLPDLRLHL 127
            L+  +  AF  L     +LT+        + C  +L  RWL+PRL      L  + + L
Sbjct: 64  LLKRYTDIAFNTLDSGVKQLTR-EGHHYLEVSCEPTLTMRWLMPRLASF-FQLTGIDVRL 121

Query: 128 SAGDGDLDPRRPGLDALLVFAEPPWPADMQVYELASERIGPVMSPRFAGYAHLRDAPAEA 187
           S   G +     GL   +   +   P +   + L +E +GPV SP +  +  ++    + 
Sbjct: 122 STAGGPVKLAGSGLSLAIRRDDFHIPPEYSKHNLVNEWVGPVFSPEY--WRQIQQNWGDI 179

Query: 188 LCGEKLLHTTSRPQAWPSWAAQHGIEPGALKHGQGFEHLYYLLEAAVAGLGVAIAPQPLV 247
           +    LLH+ SRP AW  W+ + G    A K  + FEH Y+ L+AAV GLG AI   PL+
Sbjct: 180 V----LLHSDSRPSAWSDWSQRSGHNFSANK-SKSFEHFYFCLQAAVDGLGGAIGSYPLI 234

Query: 248 AEDVRAGRLVAPWGF 262
            +D+ +GRLVAP+GF
Sbjct: 235 VDDLTSGRLVAPFGF 249