Pairwise Alignments

Query, 276 a.a., flagellar motor switch protein FliY from Pseudomonas simiae WCS417

Subject, 271 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 77.0 bits (188), Expect = 4e-19
 Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 28/264 (10%)

Query: 9   RPLAVCLLGAAVAMTSLAASAFQ------QDGKIIAGSDVTFFPYEYMD-NNKPAGFDIE 61
           R +A+ +LGAA+    +A +A Q        G +  G  V F P+  MD NN+P G+D +
Sbjct: 11  RRIAISVLGAAIVAGLVAPAAAQTVETIKSAGTVKVGMLVDFPPFGIMDANNQPDGYDAD 70

Query: 62  FMDGLGKVMGRKVETLDTRFPNLITGLQAGRFDVTNSSMYITAERVKVIDMI-PYLKSGE 120
               L K +G +V  +    PN I  LQ+ + D+  +S+ IT ER K +D   PY  +G 
Sbjct: 71  VAKLLAKELGVEVTIVPVTGPNRIPYLQSNQVDLLVASLGITEERAKNVDFSQPY--AGI 128

Query: 121 SILTLKDSSFQPKTPEEFCGHKIGSMGATSWLAQMNKLSTEYCVAKGLKPIQISEYSTDP 180
           SI     +      PE+  G  IG   A++      K++ +           I  +  D 
Sbjct: 129 SIGVFGAADLAVTKPEDLAGKTIGVARASTQDTATTKIAPQ--------DANIQRFDDDA 180

Query: 181 QTTQALLAHAVE----AQITDAAVARGVIDKLGSRVVISSDTLIYPVLNGFGVKKGNDTV 236
              QALL+  VE    + +  A +      +   ++ +S        + G  V+KG+  +
Sbjct: 181 SAVQALLSGQVELIGVSNVVAAQIEAAAPGRFNQKLQLSQQ------VQGIAVRKGSSEM 234

Query: 237 KKALLDGLEKYRATSEYAALLKKY 260
            K +   L+K +A  +  A+ +K+
Sbjct: 235 LKFVNGFLDKVKADGQLNAIHEKW 258