Pairwise Alignments

Query, 276 a.a., flagellar motor switch protein FliY from Pseudomonas simiae WCS417

Subject, 280 a.a., amino acid ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 97.4 bits (241), Expect = 3e-25
 Identities = 79/264 (29%), Positives = 119/264 (45%), Gaps = 11/264 (4%)

Query: 6   KSIRPLAVCLLGAAVAMTSLAASAFQQDGKIIAGSDVTFFPYEYMD--NNKPAGFDIEFM 63
           K I  L V  L A  A  +      +  GK++  +   + P EY+D   N+  G DI+  
Sbjct: 7   KHIAALTVACLAATSANAAGLPERIKSAGKVVVANQPNYPPMEYVDPATNELRGVDIDLG 66

Query: 64  DGLGKVMGRKVETLDTRFPNLITGLQAGRFDVTNSSMYITAERVKVIDMIPYLKSGESIL 123
             L K +G  VE  +  F  +I+ LQ GR D+ +S M    +R   +D I Y+KSG    
Sbjct: 67  VALAKELGTTVEWSNIGFEQMISSLQTGRVDLIHSGMSDLPKRRDTLDFIDYMKSGAQFY 126

Query: 124 TLKDSSFQPKTPEEFCGHKIGSMGATSWLAQMNKLSTEYCVAKGLKPIQI--SEYSTD-- 179
           T      + KT  +FCG  +G    TS+  +  K ST  C AKGL  +++  +E S D  
Sbjct: 127 TSFARKDEFKTLTDFCGKIVGMSRRTSFPDETAKWSTANCEAKGLPAVKVVGTEGSADAR 186

Query: 180 PQTTQALLAHAVEAQITDAAVARGVIDKLGSRVVISSDTLIYPVLNGFGVKKGNDTVKKA 239
            Q  Q  L  AV+   T   +    ++K    VV    T++Y    G G  K +  ++ A
Sbjct: 187 AQLKQGRLDAAVQGSETLPYLMD--LEKDTYAVVGEPFTVVY---QGIGFAKKDTELRDA 241

Query: 240 LLDGLEKYRATSEYAALLKKYNFQ 263
               L+    + EY A+  KY  +
Sbjct: 242 YAAALKALMESGEYKAIFAKYGLE 265