Pairwise Alignments

Query, 307 a.a., alkanesulfonate transporter from Pseudomonas simiae WCS417

Subject, 341 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas fluorescens FW300-N2E2

 Score =  141 bits (356), Expect = 2e-38
 Identities = 85/280 (30%), Positives = 147/280 (52%), Gaps = 6/280 (2%)

Query: 29  LTLTVGDQFFSNRIVLELSGELKDLPYKIDFKRFNTGSPVASAVASGALDVGIVGDTPVI 88
           +TL +GDQ    R V+E S  L+ + YK+ +  F   +P+  A+ +GA+D+   GDTPV+
Sbjct: 42  VTLVLGDQAKGLRTVVEASNALEGIEYKVQWANFQGAAPLFEALRAGAVDLAPAGDTPVL 101

Query: 89  SLAANGAPVKVVASTQTSLDGVGIVA--RKGIHSVADLRGKTVAIWN--GSWSQQLAYKA 144
           + A  G P+++VA  +    G+ I+      I SVADL+G+ V + +  GS +Q L  +A
Sbjct: 102 AAATGGTPLRIVAVRRGQARGIAILVPPDSTIRSVADLKGRNVVVSSARGSIAQYLLIRA 161

Query: 145 LDEAGVPRSSVNFKYLLPAEASLALTQGDIDAFGTWEPYVSLQEKEGSTLIRNAKGLMSA 204
           L  AGV  + V   ++LP +A  A   G I+A+ T+  Y +  E++G+ ++ + +G+ S 
Sbjct: 162 LANAGVDENDVKVGFVLPTDALPAFNAGKIEAWATFGVYQAFAEQKGARVLLSGEGINSG 221

Query: 205 PTYIVAYEPALAQ--KSAIIKDFIARLTRARQWSNTHVDEYAEAWSKANQSAPEIAKVWF 262
            T+I A +  L    K   + D + R  +A +W+  + DEYA  ++K N    E+++   
Sbjct: 222 LTFITASDEVLNDPLKRKALSDVLGRFAKAFEWAQDNRDEYARVFAKVNDIPLEVSQTLR 281

Query: 263 KRDAIKVLPISPTIISEAQATADFLVDAQMLKQRYDVAPL 302
                 ++ I    +   Q   D  V+ ++   R DV  L
Sbjct: 282 SWGDESLVLIEARDVQALQQVDDLFVEKKIFPHRVDVKAL 321