Pairwise Alignments

Query, 239 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 248 a.a., Predicted D-glucarate or D-galactorate regulator, GntR family from Pseudomonas fluorescens FW300-N2E2

 Score =  214 bits (544), Expect = 2e-60
 Identities = 127/235 (54%), Positives = 160/235 (68%), Gaps = 6/235 (2%)

Query: 2   PIE-SGIPLRKRSTNLAQGVVDVLTQRILLGQLKPGEKLPSESTIVLEHGVSRTVVREAI 60
           PIE    P ++RS  LAQ +V VLT++I  G LK G+KLP+ES I+  HGVSRTVVREAI
Sbjct: 4   PIEVPRFPRKRRS--LAQELVTVLTEQIRDGLLKRGDKLPTESAIMEAHGVSRTVVREAI 61

Query: 61  SKLQASGLVETRHGIGTFVLAQQAQQGLRLHVDTVASVRNML---ELRLGLEVQAAALAA 117
           S+LQA+G VETRHGIGTFVL   +  G R+   TV ++R++L   ELR+ LEV++A LAA
Sbjct: 62  SRLQAAGQVETRHGIGTFVLDTPSPSGFRIDPATVVTLRDVLAILELRISLEVESAGLAA 121

Query: 118 LRRTDEQLDHMRQALDDYQASLANNDSCVEEDKRFHQLIAEATGNTFFTEIMLHLGNAMI 177
            RR+DEQL  MR ALD    S A+    V  D  FH  IA +TGN +FT+IM HLG ++I
Sbjct: 122 QRRSDEQLAAMRAALDALNESAAHASDAVASDFAFHLEIALSTGNRYFTDIMTHLGTSII 181

Query: 178 PRTQVKGDERGGADFAKLGQLANLEHEAIFNAIKRQDPDAARAAMVLHLTNSRDR 232
           PRT+V        D  +     + EHE I++AI RQD +AARAAM LHLTNSR+R
Sbjct: 182 PRTRVNSARLAHDDQQRYMNRLSREHEEIYDAIARQDSEAARAAMRLHLTNSRER 236