Pairwise Alignments

Query, 685 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  192 bits (487), Expect = 5e-53
 Identities = 132/404 (32%), Positives = 212/404 (52%), Gaps = 15/404 (3%)

Query: 291 DTAAFDTSVDGMLDSLGALRNQSLASLDARLGHYRDRSLQK-------FVPVAATFSLLA 343
           D + F  S+DG    L A   + +A+ D  L    D+ + +        V +     +L 
Sbjct: 241 DHSLFQLSMDGRDKVLMA---EEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILL 297

Query: 344 LAALYL--FMCLQAS-IRRSASGITTLAESLRDGNLCVEVAVEGRDELAAISTALNVAVV 400
           + AL    F+  Q + +   A+ +  +AE   DG+L   + V  +DE+  ++   N  V 
Sbjct: 298 VMALLTSWFVARQLNELGNIANALADIAEG--DGDLTRRLDVRSQDEVGLLADKFNKFVD 355

Query: 401 QLRTSLLGVNHETQQLGSAVLTLNAQSGNTLTEVEDQQQQISQIATAATQLAATSLGVAR 460
           +L   +  V   +  L        A +      +  QQ +I+ +ATA T++A+ +  +A 
Sbjct: 356 RLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIAS 415

Query: 461 SCEHASDSAQQTRRIAEDSSRDSQRTTASIQQLNVRLTDTADALEQVSQQGQQIQSVVDT 520
           + E+ + +A Q+ ++ ED     Q++  SI QL   LT     + ++     +I +++ T
Sbjct: 416 NAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILST 475

Query: 521 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLSQRTQASTAQIAGTVDSLRAT 580
           IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LSQRT AST +I   +  L+  
Sbjct: 476 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKV 535

Query: 581 VSQAVALMGAACEQALTDAQSVTGLGTRLGEIAGAVQHVTDTLAQIATAVEEQAATADEV 640
            + AV++M  + +   T    V   G  L  I+ A+Q ++D   QIA+A EEQ+    ++
Sbjct: 536 TTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADI 595

Query: 641 SGNIQQVDQAAGRLLDGARAVNQAADTLSKGSQALSDNTARFRL 684
           + N + V + + +L + A+   Q A +L   +Q L+   +RF+L
Sbjct: 596 NVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639