Pairwise Alignments

Query, 685 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (471), Expect = 4e-51
 Identities = 114/349 (32%), Positives = 184/349 (52%), Gaps = 2/349 (0%)

Query: 338 TFSLLALAALYLFMCLQASIRRSASGITTLAESLRDGNLCVEVAVEGR--DELAAISTAL 395
           T  L+ +  + +   L + + R    ++   E +  G+  +   +E R  DE+  +++  
Sbjct: 283 TALLITVIVVVIVSWLVSFLFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNF 342

Query: 396 NVAVVQLRTSLLGVNHETQQLGSAVLTLNAQSGNTLTEVEDQQQQISQIATAATQLAATS 455
           N  V  + T +L ++H +  L        AQ+    + +  QQ +I+ +ATA  ++AA +
Sbjct: 343 NTFVSNMHTMVLKLSHVSAALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAAT 402

Query: 456 LGVARSCEHASDSAQQTRRIAEDSSRDSQRTTASIQQLNVRLTDTADALEQVSQQGQQIQ 515
             +A + +H + +A +        +    +T  SIQ L   +    + ++++   G QI 
Sbjct: 403 QEIAGNADHTAQNAGEAVTACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQIS 462

Query: 516 SVVDTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLSQRTQASTAQIAGTVD 575
           +++ TI+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LSQRT AST +I   ++
Sbjct: 463 TILSTIQNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIE 522

Query: 576 SLRATVSQAVALMGAACEQALTDAQSVTGLGTRLGEIAGAVQHVTDTLAQIATAVEEQAA 635
           +L+AT  +AV +M  +   A T           L +I   V+ ++D   QIA+A EEQA+
Sbjct: 523 TLQATTGKAVGIMDDSRRLADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQAS 582

Query: 636 TADEVSGNIQQVDQAAGRLLDGARAVNQAADTLSKGSQALSDNTARFRL 684
              E++ N   +   +  L   A +  + A  LS+ S  L     RF+L
Sbjct: 583 VTSEITRNTVGIRDVSNDLAQEAHSAAEQAAELSELSHELEQEIRRFKL 631