Pairwise Alignments

Query, 208 a.a., TetR family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 202 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 40/188 (21%), Positives = 77/188 (40%), Gaps = 4/188 (2%)

Query: 16  SDLKRSILREALASFNEVGIEATNIETIRARCETSVGAIYHHFGNKEGIVAALFFAALDD 75
           +D +++IL  AL+ F   G   T+  +I  +   + G ++HHF  KE ++ +LF     +
Sbjct: 15  TDKRQAILDTALSLFVSQGFHGTSTASIAKQAGVATGTLFHHFATKEVLMESLFLTIKQE 74

Query: 76  QAALREQHLKQAQTAQAGVEALVRSYVEW-VDAQPEWARFMFQSRFAVANGPHKDELLTR 134
            A     ++K+    +   E L +S ++W +D   +   F   S   +     +++ +  
Sbjct: 75  FANALLLNIKEGSDLKEHAEQLWQSAIDWSIDNPIKQLFFQQYSMSPMIAASIREQAMNS 134

Query: 135 NKQRNAQLTEWMSGEGRREAFSHIPAELLLSLIIGSAESYARAWLSGRVKHSPNHYAQLL 194
                AQL +     G     SH P EL+L    G   +  R ++         H+    
Sbjct: 135 ILGFIAQLIQKGQLMG---LISHYPIELMLENCHGQYLAATRYFIDNPELGKDKHHRDAS 191

Query: 195 AQAAWASI 202
               W ++
Sbjct: 192 FALFWKAL 199