Pairwise Alignments

Query, 334 a.a., ABC transporter permease from Pseudomonas simiae WCS417

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score =  185 bits (470), Expect = 1e-51
 Identities = 112/334 (33%), Positives = 187/334 (55%), Gaps = 22/334 (6%)

Query: 5   LLALALLLAALLAGVAIGETAISPQVVLQVLANKLWAASYVLDPIDEGVVWNYRLTRALV 64
           +L +AL++ ++ + +  G+  +S   ++  L     A+S +       V+WN RL R   
Sbjct: 21  VLIIALIIISIYS-LCTGDFQLSISQIINSLLGSGDASSNL-------VIWNIRLPRIFA 72

Query: 65  AAACGAGLATCGVILQSLLRNPLADPYLLGISAGASTGA-VLVALIGVGGGL-------- 115
           A  CG GL+  G ++Q +LRNPLA PY +GIS GA  GA V +  +G+GG          
Sbjct: 73  AILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAIN 132

Query: 116 --ISLSAGAFVGAMAAFALVILLARASGSASGTGQIILAGIAGSQLFNALTAFLITKSAS 173
              S++  AF+G++     V++LA+  G +     ++LAG+A S LF A T  LI   A 
Sbjct: 133 NPYSITIFAFLGSLLGVCAVLILAKLKGLSPEA--MVLAGVAISSLFTAATT-LIQYFAD 189

Query: 174 SEQARGILFWLLGNLSGVRWPSVWLAVPVAVAGLAVCLWHRRALDAFTFGSDSAASLGIP 233
             Q   +++W  G+L    WP V +   VA   L   +  R   +A   G ++A SLG+ 
Sbjct: 190 DMQLAAMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETAKSLGVN 249

Query: 234 VRRVQFVLVGCAALVTAVMVSIVGSIGFVGLVIPHAVRLLLGTGHSRLLPASALGGALFL 293
             +++   +  A+LVT+V V+ +G IGFVGL+ PH +R+ +G  +  L+P  ++ GA+ +
Sbjct: 250 TDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLV 309

Query: 294 IAADVLSRTLIKGQVIPVGVVTALVGAPVFALIL 327
           + AD ++RT+I   ++PVG++T+ +GAP+F  +L
Sbjct: 310 LLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343