Pairwise Alignments

Query, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  407 bits (1046), Expect = e-117
 Identities = 239/615 (38%), Positives = 353/615 (57%), Gaps = 18/615 (2%)

Query: 474  IERVIREQALSN-VAIVAHHKNGQALTCVISSRLIKVGDQPCIVTTLRDITQQQRSEAAL 532
            + R I+ Q+ +  + I+  H +  AL   I   + +   +P   + L +        A L
Sbjct: 90   LAREIKAQSPATPIVIITSHSDSGALLDAIEIGIDRYVLKPLKASALLEAMATCARAARL 149

Query: 533  KASEEKFAKAFHSSPDAISITERDTGRYVEVNDGFCRLTGYRAEEAIGLT--LYQIGIWA 590
            ++        FH+S +AI IT+ +  R V+VN  F R+TG+   E +G    + Q GI +
Sbjct: 150  ESEHRLATTVFHASSEAIMITDAEN-RIVDVNPAFTRITGFSRGEVLGRNPRILQSGIQS 208

Query: 591  DENQRAALLAELQIKGRINYLEMLWHNKR-GELLAVEVSVEPITLNETPCLLLTAR--DV 647
            +   R    A  Q     ++   +W+ +R GEL    ++V+ +   E   L   A   D+
Sbjct: 209  EHFYREMWAAINQYG---HWRGEIWNRRRNGELYPEWLAVDRVLSPEGAVLNYVAMWSDI 265

Query: 648  SLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHFKHIN 707
            S  K A+A+I +LA++D LT+LPNR L  DR +Q +   +R++   AL+F+DLD FK +N
Sbjct: 266  SERKEAEARIHYLAHYDALTDLPNRVLFNDRFTQALIHARRYDQSVALMFVDLDRFKVVN 325

Query: 708  DSLGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQELAD 767
            D+LGH VGD +LK V  RL   VR EDTV+R GGDEFVVLL+ LD     +S     ++D
Sbjct: 326  DTLGHRVGDELLKQVAERLRRCVREEDTVSRQGGDEFVVLLANLD-----MSADAAVVSD 380

Query: 768  TLRELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNTTQMF 827
             + E L+EPM+ +GH L VT SIG+A  P  G+ P  L+K AD+A+YRAK  GRN  Q F
Sbjct: 381  KILEALAEPMYFEGHELSVTCSIGIACYPSDGADPDTLMKNADLAMYRAKSVGRNNYQFF 440

Query: 828  HNSMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQLGAQS 887
               +++ A  RL +E  +R AL R EF +HY PQVD    R++  EAL+RWQHP+ G   
Sbjct: 441  SPELEQGALTRLTLENAMRRALDRDEFELHYLPQVDNPSGRLLSLEALIRWQHPERGLLL 500

Query: 888  PSEFIKVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQNDFV 947
            PS+FI + E+SGL+L +  W+L            + L       + +N+   Q RQ DF 
Sbjct: 501  PSQFIPLAEESGLVLPISLWVLRRVARQLADWRRQNLT---LVPVAINLCEAQLRQPDFA 557

Query: 948  ERVERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGYSSLT 1007
            E + R L +  +    ++LE TEG ++ + +  +  +  LK+LGV   +DDFG GYS+L 
Sbjct: 558  EALGRILSEEGVEGRWIELEFTEGALMHDTERNLRVLSALKRLGVGITLDDFGVGYSNLN 617

Query: 1008 YLKRLPVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLAFLQG 1067
             L+RLPVD LKID+S V D T + +DA I+ AI++MA+S+NL+V+AEGVET DQ  F + 
Sbjct: 618  VLRRLPVDTLKIDRSLVTDVTRNEDDAVIVDAIISMAQSMNLKVVAEGVETADQAGFFKA 677

Query: 1068 LGCHLYQGYLHSRPL 1082
              C   QG+  S+ +
Sbjct: 678  RACAEIQGHFFSKAI 692



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 387 PLRMAGTLLDITDQVEREQRLTASEEKFASLFQVSPDPICVTCLDGGTFIEINPAFTQTF 446
           PL+ A  LL+      R  RL +      ++F  S + I +T  +    +++NPAFT+  
Sbjct: 130 PLK-ASALLEAMATCARAARLESEHRLATTVFHASSEAIMITDAEN-RIVDVNPAFTRIT 187

Query: 447 GWTAAEVIDKS 457
           G++  EV+ ++
Sbjct: 188 GFSRGEVLGRN 198