Pairwise Alignments

Query, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 737 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  393 bits (1010), Expect = e-113
 Identities = 238/560 (42%), Positives = 332/560 (59%), Gaps = 37/560 (6%)

Query: 541  KAFHSSPDAISITERDTGRY--VEVNDGFCRLTGYRAEEAIGLTLYQIGIWADENQRAAL 598
            +A  SS + I IT      +    VN  F R+TGY A E  G            N R  +
Sbjct: 172  RAVESSSNGIMITSATQLDHPITYVNPAFERITGYSAAEVQG-----------RNGRFLV 220

Query: 599  LAELQIKG-----------RINYLEMLWHNKRGELLAVEVSVEPITLNE----TPCLLLT 643
              +LQ KG           R  +  +  + K G L   E+ + P+ L+E    T   +  
Sbjct: 221  RDDLQQKGLNEIRAALRDRREGHAILRNYRKDGSLFWNELHLAPV-LDESGQSTTHFVSV 279

Query: 644  ARDVSLLKNAQAQIRHLAYHDPLTNLPNRALLMDRLSQQIALLKRHNLRGALLFLDLDHF 703
              DVS   + Q Q+ + A HD LT L NR+LL DR+SQ IAL +R      ++ LDLD F
Sbjct: 280  INDVSDRIHYQEQLEYQATHDVLTGLANRSLLADRISQAIALARRDRRLVGVMLLDLDRF 339

Query: 704  KHINDSLGHPVGDTVLKIVTARLEASVRMEDTVARLGGDEFVVLLSGLDGTRTEVSNQVQ 763
            K IND LGH   D +LK V  RL+ +VR  DTVARLGGDEFV+++  +       ++ V 
Sbjct: 340  KVINDGLGHAPADKLLKTVAERLQTAVRDTDTVARLGGDEFVIVVGDILD-----ADDVA 394

Query: 764  ELADTLRELLSEPMFLDGHRLQVTPSIGVALIPDHGSTPADLLKRADIALYRAKDSGRNT 823
             +A  ++  L++P+F++G  L VT SIGV+L P  G T   LL+ AD+A+YR K+ GRN 
Sbjct: 395  VVAGKIQRALAQPLFVEGKELFVTASIGVSLFPRDGETGDILLRNADVAMYRVKEYGRNN 454

Query: 824  TQMFHNSMQKTASERLRMETDLRLALSRGEFSVHYQPQVDARGNRIVGAEALVRWQHPQL 883
             + +   M   A +RL ME +LR AL   EF V+YQP+V  +   IVGAEAL+RW HP++
Sbjct: 455  YRFYLPEMSSMALDRLDMEGNLRRALETDEFQVYYQPKVSLQQGTIVGAEALLRWMHPRI 514

Query: 884  GAQSPSEFIKVLEDSGLILEVGTWILDEACAAFQQLIAEGLVDPLNFSLCVNISPRQFRQ 943
            G  +P+EFI + E+SGLI+ +G  +++  C   +    EGL  PL   + +NIS RQFRQ
Sbjct: 515  GQINPNEFIPLAEESGLIIPLGEKVIELVCRQIRAWREEGL-PPLK--VAINISARQFRQ 571

Query: 944  NDFVERVERSLKQHKLPFSLLKLEITEGIVIQNLDDTISKMRRLKKLGVSFAMDDFGTGY 1003
             +  E V R L+++++P  +L +E+TE +V+ + D     +R LK LGV+ ++DDFGTGY
Sbjct: 572  ENLGETVRRLLEEYQVPGEMLDIELTESMVMHDTDHAALTLRELKDLGVTLSLDDFGTGY 631

Query: 1004 SSLTYLKRLPVDALKIDQSFVRDATHDPNDAEIIRAIVAMARSLNLEVIAEGVETQDQLA 1063
            SSL+YLKR P+D LKID+SFVRD   + +DA I  A++AMA SL L V+AEGVET +QLA
Sbjct: 632  SSLSYLKRFPIDCLKIDRSFVRDINSNADDAAIASAVIAMAHSLGLNVVAEGVETAEQLA 691

Query: 1064 FLQGLGCHLYQGYLHSRPLP 1083
             L+  GC  +QGY  SR +P
Sbjct: 692  LLRQHGCDEFQGYFFSRAVP 711



 Score = 30.8 bits (68), Expect = 4e-04
 Identities = 16/58 (27%), Positives = 30/58 (51%)

Query: 438 INPAFTQTFGWTAAEVIDKSAEQIGLWDESSKRLQRIERVIREQALSNVAIVAHHKNG 495
           +NPAF +  G++AAEV  ++   +   D   K L  I   +R++   +  +  + K+G
Sbjct: 196 VNPAFERITGYSAAEVQGRNGRFLVRDDLQQKGLNEIRAALRDRREGHAILRNYRKDG 253