Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 440 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score =  107 bits (267), Expect = 8e-28
 Identities = 81/298 (27%), Positives = 144/298 (48%), Gaps = 16/298 (5%)

Query: 169 LSVYVLASIAAIILAVVGYLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLPM 228
           L V++L   A   + ++ +L        LR L R       GNL  R  +  + K +  +
Sbjct: 142 LFVFMLGGFALYCMFLIWFLSRR-----LRELERVTHDFANGNLQARASTKSS-KSVGKL 195

Query: 229 IDSFNTMLERLAKGFVQLGQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLASN 288
             SFN M ++++   +    ++  +AH+LRTPI  +  + +V  +   + +  QQ+ AS 
Sbjct: 196 NHSFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQV-ASI 254

Query: 289 VEELERLARMLDNMLFLARTDPASALRQRQELNAADEVERIAEYFEGLAGDVDISIH--- 345
           +E+ E +  M+D +L+ A+ +   +  Q Q L      + +A++ +  +    + I    
Sbjct: 255 IEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVN---QWLADFIDEQSHKSSLQIQYLP 311

Query: 346 AEGDGVIWAEPMLLRRALANLCANAIKYGAPGTVLQIRAVPSAEGIHLRVSNRGETIAAE 405
           +    ++ A+P LL RAL NL  NA KY     +++   V +   + + + + G  I  +
Sbjct: 312 SLQPLMLDADPQLLTRALVNLIRNAEKYAGDRLLIEASTVDAK--LCIAIHDNGPGIEEQ 369

Query: 406 HLPQLFERFYRVDESRERSAQSNGLGLSIVATIMQLHNGRYDVS-SEAGVTCFELFFP 462
           H P +F+ FY  D SR ++    GLGL+IV  IM  H G   ++ S  G  CF L+ P
Sbjct: 370 HWPHIFDAFYSTDSSRNKAQSGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLP 427