Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 462 a.a., heavy metal sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (550), Expect = 1e-60
 Identities = 142/469 (30%), Positives = 247/469 (52%), Gaps = 20/469 (4%)

Query: 5   RHYSLTLRLALIF----ALLAFALLATLGVALYRELERELIMRDDAALIYRIDQLRNLLN 60
           RH  ++L+   ++     LLA  LL  LGV +  +++   + +D+  L    D ++ +L+
Sbjct: 4   RHPQISLKTRTLYLVGGTLLACFLL--LGVMIDSQVKGHFLHQDEDELNVVADSVKGMLS 61

Query: 61  D-SNTLDLIKTKPELFQNMLGNRESALSIAAPGQQPLLTVNPGNIN---LPSVPPVPKNH 116
             S   D  +    L Q ++G+     ++     Q + +    +++   L       K  
Sbjct: 62  SLSKPQDRHQIDNSLSQAVVGHHGIFYALYNNDNQLIYSNKDSDLSHFLLLDAKERVKAS 121

Query: 117 KLTFADVH--HFPGINGVPFATVAASIDSGDLGSLQVTTGRLMTERTAVLASYRLSVYVL 174
            L   +V   H  G      A +  ++  G  G L V     +    A L+ +  +++  
Sbjct: 122 ALVVVEVQEQHLRG------ALLGVTLPDGRSGKLVVAND--IDFHLAFLSEFHRTLWST 173

Query: 175 ASIAAIILAVVGYLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLPMIDSFNT 234
             +  ++  +  +L +  GL PL+RL++   GI    L  RL    AP EL  +I +FN 
Sbjct: 174 LFLVWLLTILAAWLAIRFGLRPLQRLSKEISGITTERLDLRLKPELAPIELSELIAAFNH 233

Query: 235 MLERLAKGFVQLGQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLASNVEELER 294
           M+  +  GF +L   S D+AHELRTP+  L  + +V L Q+RS E YQ+L+ SN+EELER
Sbjct: 234 MIGEVELGFKRLSHFSADIAHELRTPLTALAMQNEVLLSQSRSTEEYQELIYSNLEELER 293

Query: 295 LARMLDNMLFLARTDPASALRQRQELNAADEVERIAEYFEGLAGDVDISIHAEGDGVIWA 354
           L  M+++ML+LA++D      ++Q++    E +++ +Y   LA + ++SI  +G G I+A
Sbjct: 294 LTVMVNDMLWLAKSDNGLIEPKKQKIALDKEADKVIDYLSVLADEKNVSIVRDGSGEIYA 353

Query: 355 EPMLLRRALANLCANAIKYGAPGTVLQIRAVPSAEGIHLRVSNRGETIAAEHLPQLFERF 414
           +  +++RAL+NL  NA+++  PG+ + +    + E  +++V+N G  I  +H+  LF+RF
Sbjct: 354 DNGMMQRALSNLIGNAVRHAEPGSEITVGIAQTPEATYVKVNNLGTPIPEQHVNHLFDRF 413

Query: 415 YRVDESRERSAQSNGLGLSIVATIMQLHNGRYDVSSEAGVTCFELFFPK 463
           Y+V+ +R+R   S GLGL+IV +I  +H G+    S  G TCF L  PK
Sbjct: 414 YKVEAARQREGSSTGLGLAIVKSIADIHGGKVSARSRDGNTCFTLTLPK 462