Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score =  117 bits (293), Expect = 1e-30
 Identities = 88/326 (26%), Positives = 164/326 (50%), Gaps = 26/326 (7%)

Query: 162 AVLASYRLSVYVLASIAAIILAVVGYLLVHRGLL-PLRRLARHAQGIGVGNLAERL--DS 218
           A+ A  R   +V+  I  +I  +V YL ++RG++ PL +L + A+ +  G   +++  DS
Sbjct: 309 ALQADVRNQTFVVGLIGLLIALIVSYL-INRGIIKPLEQLKQGAEWVSNGRYDQKVIVDS 367

Query: 219 HGAPKELLPMIDSFNTML----ERLAKGFVQL--------------GQVSTDMAHELRTP 260
                EL    +   T +    ++L K   +L               ++   ++HELRTP
Sbjct: 368 DDEFGELAKAFNKMATQINISDDKLKKHAEELKISYNELKELDKLKSELIAVVSHELRTP 427

Query: 261 INNLLGETQVALQQNRSI--ESYQQLLASNVEELERLARMLDNMLFLARTDPASALRQRQ 318
           + ++ G  ++ L        +S ++ L    + + RL R++++ML L++ +       R+
Sbjct: 428 LTSIKGYVELVLDGTMGAINDSQKKCLQVADDNIVRLRRLIESMLDLSKIERGELEMYRE 487

Query: 319 ELNAADEVERIAEYFEGLAGDVDISIHAEGDGV-IWAEPMLLRRALANLCANAIKYGAPG 377
           ++N    V  + EY + LA + +I ++ E + + I A+   + + L NL  NAIK+    
Sbjct: 488 KVNLRSIVCDVIEYLKPLATEKNIKLNKEVEDIAIEADKDRITQVLTNLIENAIKFSPAN 547

Query: 378 TVLQIRAVPSAEGIHLRVSNRGETIAAEHLPQLFERFYRVDESRERSAQSNGLGLSIVAT 437
             + +  V   E IHL+V++RG  I  + + ++F RFY+VD S +R    +GLGL++  +
Sbjct: 548 ESILVSGVLEDEHIHLKVTDRGAGIPKKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKS 607

Query: 438 IMQLHNGRYDVSSEAGV-TCFELFFP 462
           I++ H G   V SE G  + F +  P
Sbjct: 608 IVEAHKGSIWVESELGKGSTFHIILP 633