Pairwise Alignments

Query, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 491 a.a., sensor kinase CusS (RefSeq) from Shewanella sp. ANA-3

 Score =  192 bits (489), Expect = 2e-53
 Identities = 133/479 (27%), Positives = 234/479 (48%), Gaps = 17/479 (3%)

Query: 3   TRRHYSLTLRLALIFALLAFALLATLGVALYRELERELIMRDDAALIYRIDQLRNLLNDS 62
           +R  +SL+LRL    +L            +   +E     +D + L      L  +L   
Sbjct: 6   SRHPFSLSLRLTFFISLSTILAFIAFTWFMLHSVENHFAEQDVSDLQQISTTLNRILQSP 65

Query: 63  NTLDLIKTKPELFQNMLGNRESALSIAAPGQQPLLTVNPGNINLPSVPPVPKNHKLTFAD 122
              D  K   ++ +++   R  AL +  P  + L +   G    P+V     +      D
Sbjct: 66  EDPDEKKVS-KIKESIASYRNVALLLLNPRGEVLFSSAQGAALRPAVNSADFSEHSHARD 124

Query: 123 VHHF-------PGINGVPF--------ATVAASIDSGDLGSLQVTTGRLMTERTAVLASY 167
           V  +       P   G           A+   +I  G   +  + TG  +      L + 
Sbjct: 125 VFLWTVEDPARPMDTGSEMKMETYRIIASSGQAIFQGKQQNYVMLTGLSINFHLHYLDAL 184

Query: 168 RLSVYVLASIAAIILAVVGYLLVHRGLLPLRRLARHAQGIGVGNLAERLDSHGAPKELLP 227
           + ++  +A + ++++ ++  + V +G LPLR ++   + I   NL  RL+    P EL  
Sbjct: 185 KKNLIAIAVVISLLIVLIIRIAVRQGHLPLRNVSNAIKSITSENLDTRLEPTRVPIELEQ 244

Query: 228 MIDSFNTMLERLAKGFVQLGQVSTDMAHELRTPINNLLGETQVALQQNRSIESYQQLLAS 287
           ++ SFN M+ ++   F +    S D+AHE+RTPI NL+ +T++AL Q+R+ +  + +L S
Sbjct: 245 LVISFNHMIGKIEDVFTRQANFSADIAHEIRTPITNLVTQTEIALSQDRTQKELEDVLYS 304

Query: 288 NVEELERLARMLDNMLFLARTDPASALRQRQELNAADEVERIAEYFEGLAGDVDISIHAE 347
           ++EE  R+ +M+ +MLFLA+ D    +  R   +   EV ++ E+FE  A + +I++   
Sbjct: 305 SLEEYNRMTKMVSDMLFLAQADNNQLIPDRVRFDLRAEVMKVFEFFEAWAEERNITLKFN 364

Query: 348 G-DGVIWAEPMLLRRALANLCANAIKYGAPGTVLQIRAVPSAEGIHLRVSNRGETIAAEH 406
           G   ++  +P + RRA+ NL +NA++Y   G  + +          L + N G+ I  EH
Sbjct: 365 GMPCLVEGDPQMFRRAINNLLSNALRYTPEGQAITVSIREQESFFDLVIENPGKPIPEEH 424

Query: 407 LPQLFERFYRVDESRERSAQSNGLGLSIVATIMQLHNGRYDVSSEAGVTCFELFFPKRE 465
           L +LF+RFYRVD SR+R  + +G+GL+IV +I++ H+GR  V S+   T F L  P+ E
Sbjct: 425 LSRLFDRFYRVDPSRQRKGEGSGIGLAIVKSIVEAHHGRVQVESDVRSTRFILSVPRLE 483