Pairwise Alignments

Query, 262 a.a., twin-arginine protein translocation system subunit TatC from Pseudomonas simiae WCS417

Subject, 249 a.a., Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  297 bits (761), Expect = 1e-85
 Identities = 138/247 (55%), Positives = 190/247 (76%), Gaps = 4/247 (1%)

Query: 10  QHMPLVSHLTELRTRLLRCVAAIFIIFAGLFAFTQQIYTFVSTPLRQYLPAGATMIATDV 69
           Q  PL+SHL ELR++LL+ +A++ I+F     +   IY +++ PL Q LP G +MIATDV
Sbjct: 3   QQQPLISHLLELRSKLLKSIASVLIVFICSVYWANDIYHYMAIPLMQSLPLGGSMIATDV 62

Query: 70  SSPFLTPLKLTMMVSLFLAIPVILHQIWGFIAPGLYKHEKRIAVPLLVSSILLFYTGMAF 129
           ++PF  P KLT+++S F+A+P +L+QIW F+APGLYKHEKR+ +PLL SS +LFY G+AF
Sbjct: 63  AAPFFAPFKLTLVLSFFVAVPYVLYQIWSFVAPGLYKHEKRLVMPLLFSSTVLFYLGIAF 122

Query: 130 AYFLVFPLIFKFFAAATPAGVEMMTDITSYLDFVMTLFFAFGVAFEIPVAVVLLVWIGVV 189
           AY++VFP++F FFA   P GV++ TDI+SYLDFV+ LFFAFG++FEIP+AVVLL W GV 
Sbjct: 123 AYYIVFPVVFGFFANTAPEGVQVATDISSYLDFVLKLFFAFGLSFEIPIAVVLLCWAGVT 182

Query: 190 NVAYLKKIRPYVIIGCFVVGMILTPPDIFSQTLLAVPMWMLFEIGILFSGLISKRGEHPD 249
           +   LK+ RPY+I+G FVVGM+LTPPD+ SQT+LAVPM +LFE G+  +   SK    PD
Sbjct: 183 SPEDLKQKRPYIIVGAFVVGMLLTPPDVISQTMLAVPMLILFEAGLFAARFYSK----PD 238

Query: 250 DQPDDDQ 256
           D+ D+++
Sbjct: 239 DETDEEE 245