Pairwise Alignments

Query, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (455), Expect = 7e-50
 Identities = 110/330 (33%), Positives = 179/330 (54%), Gaps = 1/330 (0%)

Query: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60
           MATI DV  LAG+S  TVS V+N+T  V    R  V AA++QL Y P+++A++L   TT 
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLI 120
           +IGL++P+  + YF  +    E   ++ G  +++ NS ++ + ++  +  L  +R D ++
Sbjct: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129

Query: 121 VTSVGGDDSGLAAGLSAVRTPMVIVDRALDGIDVDLVRIDHEEGAYLATRHLLELGHRDI 180
           + S   ++  L        +P+VI++R L    +    +D  + A LA +HLL LGHR I
Sbjct: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189

Query: 181 ACIGGPAHTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTEN-PPS 239
           ACI  P  +   ++R   Y +AL E G+ ++++   E D T  GGY A  QLL +    +
Sbjct: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249

Query: 240 AIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLGETA 299
           A+FA ND +  G +RA  E  I VP ++S+IG D+     +  P+L++V   I +L + A
Sbjct: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309

Query: 300 AELLLRRIATPHMPIDQRIVTPSIVLREST 329
             L +            R+   S++ REST
Sbjct: 310 ISLAVEIANKKPQDAQHRLYQGSLIAREST 339