Pairwise Alignments

Query, 305 a.a., ribokinase from Pseudomonas simiae WCS417

Subject, 303 a.a., ribokinase (RefSeq) from Shewanella sp. ANA-3

 Score =  219 bits (558), Expect = 6e-62
 Identities = 125/300 (41%), Positives = 186/300 (62%), Gaps = 5/300 (1%)

Query: 5   VVVVGSLNMDLVTRASRLPRAGETLIGQTFSTVPGGKGANQAVASARL---GADVSMIGC 61
           ++V+GS N D V     LP  G+TL+ + +    GGKGANQAVA ARL    A+V+ I  
Sbjct: 4   ILVIGSANADHVMNFEYLPVPGQTLMSRAYRLEHGGKGANQAVACARLCQGDAEVAFICH 63

Query: 62  VGSDAYGSQLREALLVEGIDCQAVSTVDG-SSGVALIVVDDSSQNAIVIVAGSNGELTPA 120
           +G D+ G+ +R + L +GI  + ++ V   S+G ALI V D+ +N+I I AG+N +LTP+
Sbjct: 64  LGQDSVGNDMRTSWLKDGIKAEGITQVANMSTGTALIFVGDNGENSIGIAAGANADLTPS 123

Query: 121 SLQAFDAVLQAADVIVCQLEVPMNTVGYALKRGRELGKTVILNPAPASGPLPAEWYASID 180
            L+   A+   A  ++ QLE PM TV +AL+  + LG T +LNPAPA+     ++   +D
Sbjct: 124 ELEKHYALFANAQFLLIQLETPMETVHHALQTAKRLGITTVLNPAPATSQ-ELDYLKWVD 182

Query: 181 YLIPNESEASALSGVTVDSIDAAKVAATQLIQAGAGKVIVTLGAQGALFTDGQRFEHLQA 240
            + PNE+EA AL+G+ V++ + A++AA  L Q G   V++TLG++GA  +       + A
Sbjct: 183 IITPNETEAEALTGIEVNNEEDAELAAQWLHQQGVATVVITLGSKGAFISSAGFTGLIPA 242

Query: 241 PKVKAVDTTAAGDTFVGGFAAALANGKSEAEAIRFGQVAAALSVTRAGAQPSIPTLHDVQ 300
             V+A+DT AAGDTF G     L+ G S A A+ F   A+A++VTR GAQ +IP  H+VQ
Sbjct: 243 LTVQAIDTVAAGDTFNGALVVGLSEGMSIAAAVGFANAASAITVTREGAQRAIPYRHEVQ 302