Pairwise Alignments

Query, 235 a.a., 16S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 243 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 20/171 (11%)

Query: 71  PPAKLPLTLLLALPRPKMLRRVLQTVAAMGVPKVVLVNSYRVEKSFWQTPFLEPEAI--- 127
           PPA+  LTL+ +LP+ +    V++    +GV  +  V S R +        + PEA    
Sbjct: 72  PPAQPRLTLIQSLPK-QGFDEVIRQATELGVTTIQPVISDRSQ--------VRPEAQKTD 122

Query: 128 --REQLILGLEQARDTVLPEI----IIEKRFKPFVEDRLPAMAAGSLGLIGHPGDYPACP 181
             R+  I   EQ+    LP++    +  +       D L  +      L        A P
Sbjct: 123 RWRKIAIEASEQSERLYLPQLEPIRLWSEAIAQIPADSLRCICLARRSLPNLLPWLQAQP 182

Query: 182 RGLDEPVTLAIGPEGGWIPYEVDLLTQAGLQPVQLGARILRVETAVTALLA 232
              D  + +AIGPEGGW   E++     G  PV LG+ ILR  TA    L+
Sbjct: 183 AWTD--LAIAIGPEGGWSDAEIEQAIAVGWTPVSLGSSILRAVTAPIVALS 231