Pairwise Alignments

Query, 463 a.a., transporter from Pseudomonas simiae WCS417

Subject, 468 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  698 bits (1801), Expect = 0.0
 Identities = 361/467 (77%), Positives = 408/467 (87%), Gaps = 4/467 (0%)

Query: 1   MKSHWPLLAAMAL-GGCVNLAPQYERPEAPVSEQWLPA-ANLP--KGKVGADIKWQQFFT 56
           M+  WP LA  AL  GCVNLAP Y+RPEAPVS QWLP  A  P   G V  DI+WQ FF 
Sbjct: 1   MRLFWPSLAVTALLAGCVNLAPDYQRPEAPVSSQWLPGTAGQPAASGSVPTDIEWQNFFI 60

Query: 57  DRRLAQLQQLALANNRDLRLASLNVEKAQAQYRIKRADLFPTVDAGVSGTHSRTPGSLSN 116
           D RL +LQ LAL NNRDLRLASLNVEKAQAQYRI+RA   PT+DA  SGTH+RTP S S 
Sbjct: 61  DNRLVRLQTLALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPSSTSM 120

Query: 117 TGTAVTTHDYSAQLGLSSYELDVFGRVRNLRDEALEDYLALTETRRSTQISLVAEVATAW 176
           TG    +H+YSAQLGLSSYELDVFGR++NL+DEALEDYLALTETRRSTQISL+AEVAT W
Sbjct: 121 TGKPSISHEYSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRSTQISLIAEVATGW 180

Query: 177 LTLAADNERLLLAQETLTSQLATYDLTQRSYALGGSSALSVAQAQTTVESARGDVASYES 236
           LTLAADN+ L LA++TL SQ  +YDLT+ S+ALGGSS L VAQAQTTVESARGDVA Y+S
Sbjct: 181 LTLAADNQLLKLAEDTLASQQKSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVAQYKS 240

Query: 237 QILQDRNALRLLVGSDLPEALLPGTRLESAAVLVDIPAGLPSSLLQQRPDVLSAEHTLKS 296
           QILQDRNALRLLVGSDLPE LLP    +S A LV +P GLPSSLLQ+RPDVLSAEHTLK+
Sbjct: 241 QILQDRNALRLLVGSDLPEELLPNADTQSVAQLVQVPDGLPSSLLQRRPDVLSAEHTLKA 300

Query: 297 ANIDIGAARAAFYPSISLTANAGSSSSALAGLFKSGSGAWTFAPSISVPIFDGGSNRATL 356
           ANIDIGAARAAF+PSI+LTA+AGSSS++L+GLFKSG+GAW+FAPSISVPIFDGG+NRATL
Sbjct: 301 ANIDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGANRATL 360

Query: 357 DSAKVEREIQLQTYQQTLQTAFREVADALAVRSTLDRRIAAQQALTDASRKSFELSDALY 416
           DSAKVE +IQ+QTYQQT+QTAF+EVADALAVRSTLD R+AAQQA TDASR+S+EL+DALY
Sbjct: 361 DSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELADALY 420

Query: 417 RGGSQSYLEALDAQRSLYSAQQDLITLRLTEQSNRITLYKVLGGGWN 463
           RGGSQSYLEAL++QRSLYSA+QDLI+LRLTEQSNR+TLYKV+GGGWN
Sbjct: 421 RGGSQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWN 467