Pairwise Alignments

Query, 635 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  488 bits (1256), Expect = e-142
 Identities = 297/640 (46%), Positives = 410/640 (64%), Gaps = 9/640 (1%)

Query: 5   MTHLLGDASVTLKLALGFSLVLALSLIIAVTGWQALAASLYRSQTLTVLAQLAVAGEELR 64
           M +   +  V+ KLALGF +VLAL+LI+A  GW +L + + RS  +T ++ L     +LR
Sbjct: 1   MNNWFANIGVSRKLALGFGVVLALTLILAWNGWGSLGSVIQRSGWMTEISLLNKTLTDLR 60

Query: 65  ADRILYRTLD-DANSLNRLSASMEKIDGHLKALSNRLIAPKPIEYLQEMARIGATFNTTL 123
             R+ +   + DA S  RL  ++         L N    P  +  L+E A   A +  +L
Sbjct: 61  IARLQFMLANGDAESTERLDKNLGIYLAQQTQLLNTFKNPINVAQLKEQAGYNAQYQNSL 120

Query: 124 KDVPSLVKTRENTREELKQSSTRTGDVLAQLAS---DLPDQEDEK--ALDAVENLRQAIE 178
            D+          R  +  ++TR G++ A + +    LPD E+++   L A+  +++ ++
Sbjct: 121 NDMRKAYAQANGARTTIDGAATRLGELTAGVTNHVLQLPDYEEDRFAQLLAISQIKEDVQ 180

Query: 179 QAED--RAQSPAWAASSLDAYAQAVNDAERNL-ELAQAAVAKLPVDSTALKNAVLEIRTR 235
           +A+   R    A A  ++ A    ++ A+  L   A A  A        ++  + E R+ 
Sbjct: 181 RAQYLLRVYMAAPANDAVKAIYTQLDTAQATLGRHAGALDANSGAALQQIRTVLDEYRSA 240

Query: 236 LTRLKEAQLTTEKSQNQLEQQLDQLLGQSDLLSQDQTQRRDHEAEQARTQTLGVTAAALL 295
           +  L+ A     K++ ++  Q  +++  SD L Q Q  R D E+  AR++ +  T  AL+
Sbjct: 241 IQALETATQAIAKARQEMTDQQKEIVRISDSLYQFQLDRLDVESSDARSRLIVSTLLALV 300

Query: 296 LGVLAAWVIAGQIVTPLRKALSVANRIAEGDLSHEVQTRRKDELGQLQHSMTQMTLNLRG 355
           LGVLAAW+I  QI+ PLR  ++   RIA GDLS   Q +R+DELG LQ  + QM   LR 
Sbjct: 301 LGVLAAWLITRQIILPLRTTMADVERIASGDLSETAQIQRRDELGVLQRGIQQMGSTLRE 360

Query: 356 LIGNISDNAQQIASAAEELSTITEQTRAGVSNQREETEQVAAAMNQMLATAQEVARHAEQ 415
           LIG I D   QI++AAEELS +T+QT AGV++Q+EET+QVA AM++M AT QEVAR+AEQ
Sbjct: 361 LIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHEMSATVQEVARNAEQ 420

Query: 416 ASIAAGQANHQTDLGDQVVTDVVAQIEHLAHEMARSSQAMLALQRESQKIGSVLDVIKSV 475
           A++AA +A+ +   GD+VVT+VV QIE +A  + RS++AM ALQ ES KIGSV++VI++V
Sbjct: 421 AALAATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDKIGSVMNVIRAV 480

Query: 476 SQQTNLLALNAAIEAARAGEAGQGFAVVADEVRSLAQRTQQSAEEIEELIGGLHSGTQQV 535
           ++QTNLLALNAAIEAARAGEAG+GFAVVADEVR LAQRTQ+S EEIE L+  L +GTQQV
Sbjct: 481 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAALQNGTQQV 540

Query: 536 ADILDYSRTLTDNSVGLARNAGDALSEIARTVLVIQEMNPQIAAAAEEQSAVAEEINRSV 595
           A I+  SR LTD+ V LAR AG +L  I RTV  IQ MN QIAAAAEEQSAVAEEI+RSV
Sbjct: 541 ASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQSAVAEEISRSV 600

Query: 596 LKVRDASEQTAAASEQTAAASIELARLGTDLQQCVGQFKV 635
           + VRD SEQTAAASE+TAA+S ELARLG  LQ  V +F++
Sbjct: 601 VNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFRL 640