Pairwise Alignments

Query, 233 a.a., VacJ family lipoprotein from Pseudomonas simiae WCS417

Subject, 260 a.a., VacJ family lipoprotein (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (334), Expect = 4e-36
 Identities = 77/205 (37%), Positives = 116/205 (56%), Gaps = 8/205 (3%)

Query: 30  NSDADPWEGVNRPIFAFN-DVLDTYALKPLAQGYQLITPGVVQDGIHNVFNNLGEVKNLA 88
           N + DP EG NR ++ FN   LD Y  +P+A GY  I P  V+ G++N   N  E  ++ 
Sbjct: 41  NDERDPLEGFNRAMWDFNYQFLDKYFYRPVAHGYNDILPRPVKTGVNNFVLNFEEPSSMV 100

Query: 89  NDVLQVKFHSAGVDTSRFLLNSTIGLVGLIDVATPMGLQRSDEDFGQTLGYWGVNSGPYL 148
           N+ LQ K+  A     RF +N+TIGL+G+IDVA  MGLQR  ++F + LGY+GV +GPY 
Sbjct: 101 NNALQGKWGWAANAGGRFTINTTIGLLGVIDVADMMGLQRKQDEFNEVLGYYGVPNGPYF 160

Query: 149 VLPFLGPSTLRDAPAILPDAYANPVRYMGDVPTRNSLYSVGV--IDGRAQYLASEKLMTG 206
           + PFLGP   R+  +   D    P   + ++    SL   G+  +  RA  +  E+L+  
Sbjct: 161 MAPFLGPYVTRELASDWVDGLYFP---LSELTMWQSLAKWGLKNLHRRASAIDQERLVDN 217

Query: 207 --DKYTFIRSAYLQNRAFKINGANV 229
             D YTF++ AY Q+  +K+   ++
Sbjct: 218 ALDPYTFVKEAYFQHLDYKVYDGDI 242