Pairwise Alignments

Query, 233 a.a., VacJ family lipoprotein from Pseudomonas simiae WCS417

Subject, 261 a.a., vacJ lipoprotein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (315), Expect = 6e-34
 Identities = 72/201 (35%), Positives = 115/201 (57%), Gaps = 8/201 (3%)

Query: 34  DPWEGVNRPIFAFNDV-LDTYALKPLAQGYQLITPGVVQDGIHNVFNNLGEVKNLANDVL 92
           DP+EG NR ++ FN + LD Y  +P+A GY    P   + G++N   NL E  ++ N++L
Sbjct: 46  DPFEGFNRVMWDFNYLYLDRYLYRPVAHGYNDYIPLPAKMGVNNFLQNLEEPSSVVNNLL 105

Query: 93  QVKFHSAGVDTSRFLLNSTIGLVGLIDVATPMGLQRSDEDFGQTLGYWGVNSGPYLVLPF 152
           Q K+  A     RF +N+TIGL+G+IDVA  MG+ R  ++F + LGY+GV +GPY + PF
Sbjct: 106 QGKWGWAANAGGRFTVNTTIGLLGVIDVADMMGMTRKQDEFNEVLGYYGVPNGPYFMAPF 165

Query: 153 LGPSTLRDAPAILPDAYANPVRYMGDVPTRNSLYSVGV--IDGRAQYLASEKLMTG--DK 208
            GP  +R+  +   D    P   + ++    S+   G+  +  RA  +  E+L+    D 
Sbjct: 166 AGPYIVRELASDWVDGLYFP---LSELTMWQSVLKWGLKSLHARASAIDQERLVDNALDP 222

Query: 209 YTFIRSAYLQNRAFKINGANV 229
           Y F++ AY+Q+  +K+   NV
Sbjct: 223 YAFVKDAYIQHMDYKVYDGNV 243