Pairwise Alignments

Query, 546 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 557 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  233 bits (594), Expect = 1e-65
 Identities = 170/499 (34%), Positives = 250/499 (50%), Gaps = 30/499 (6%)

Query: 59  TFSELQAHAARFGNFLREQGVKPGERVAGLMPRTVELLIAILGTWRIGAVYQPLFTAFGP 118
           TF +++ ++ +  NF  + G+K G+ V   +    E    +LG  +IGAV  P       
Sbjct: 65  TFKDMKKYSDKAANFFLKHGIKKGDTVMLTLKSRYEFWFCMLGLHKIGAVAIPATHMLTT 124

Query: 119 KAIEQRLGCSEARWIVTDAHNRPKLDDVID------CPRIIVTGAGPRNPDDY-DFWTVL 171
           K I  R+  +  + IV    N   + D +D         ++       N D + DF   L
Sbjct: 125 KDIVYRIEKAGLKMIVCIGENG--VPDYVDEAVSEINSDVLKACVSNLNNDSWIDFSKEL 182

Query: 172 DRQQADCVPEL--LDASAPFLLMC--TSGTTGPAKPL----EVPLSAILAFKGYMRDSID 223
           +    D    +  +D     +L+   +SGTTG  K +    E PL  I   K +     +
Sbjct: 183 EESSEDFTRPVGEMDTKNDDVLVAYFSSGTTGYPKLIQHDHEYPLGHITTAKYWQ----N 238

Query: 224 LREDDHFWNLADPGWAYGLYYAVTGPLACGRATLFYD-GPFAVDSTCRIIAKYAITNLAG 282
           + +D   + +AD GWA  +   + G    G A   YD   F   +    IAKY IT    
Sbjct: 239 VEDDGLHYTVADSGWAKCIRGKLYGQWIAGTAVFVYDYDRFDAGNMLEKIAKYKITTFCA 298

Query: 283 SPTAYRLLIAAGAAFADTVRGRLRVISSAGEPLNPQVIRWFADELGVVIHDHYGQTEIGM 342
            PT YR +I    + AD     L    +AGEPLNP+V   F +  G+ + + +GQTE  +
Sbjct: 299 PPTIYRFMIKQDISKADF--SSLHYAVTAGEPLNPEVYNKFLEFTGLRLMEGFGQTETVV 356

Query: 343 VLCNHHGLRHPVREGSAGYAVPGYRIVVLDDAHRELPPGRPGVLAVDRERS-PLCWFEGY 401
            + N   +    + GS G  VP + +++     +E   G  G LA   E   PL  F GY
Sbjct: 357 SVANFTWM--DPKPGSMGKPVPIFDLMIKGPDGKECDVGEEGELAFKTEDGKPLGLFSGY 414

Query: 402 FGMPTQ---AFVDRYYLSGDIVELNDDGSISFVGRNDDVITTSGYRVGPFDVESALIEHP 458
           F  P +   A+ D YY +GD    ++DG + FVGRNDD+I +SGYR+GPF+VESALI HP
Sbjct: 415 FKDPERTKKAWYDGYYHTGDTAWKDEDGYLWFVGRNDDLIKSSGYRIGPFEVESALISHP 474

Query: 459 AVVEAAVIGKPDPQRTELIKAFVVLNSQSLPSTELAEVLRLHVRQRLAAHAYPREIEFVE 518
           AV+E A+ G PDP R +++KA +VL S+   S EL + L+ HV+   A + YPR IEFV+
Sbjct: 475 AVLECAITGVPDPVRGQIVKATIVLTSEYEASEELKKELQDHVKHNTAPYKYPRAIEFVK 534

Query: 519 HLPKTPSGKLQRFILRNQE 537
            LPKT SGK++R  +R  +
Sbjct: 535 ELPKTISGKIRRVEIRETD 553