Pairwise Alignments

Query, 546 a.a., AMP-binding protein from Pseudomonas simiae WCS417

Subject, 636 a.a., acetate--CoA ligase from Methanococcus maripaludis S2

 Score =  219 bits (559), Expect = 2e-61
 Identities = 168/547 (30%), Positives = 267/547 (48%), Gaps = 41/547 (7%)

Query: 27  AMNACIECCDRHALGDA---VALYCETPDGRATHHTFSELQAHAARFGNFLREQGVKPGE 83
           ++NA   C DRH  G+     A+ CE  DG     T+ EL     +F N L   GV+ G+
Sbjct: 59  SLNASYNCVDRHIKGNRRNKAAIICEKEDGSCGILTYYELYREVNKFANVLENLGVEKGD 118

Query: 84  RVAGLMPRTVELLIAILGTWRIGAVYQPLFTAFGPKAIEQRLGCSEARWIVTD--AHNRP 141
            V   MP   E +IA+L   RIGA++  +F+ F   A+  R+  S+++ +VT    + R 
Sbjct: 119 VVTIYMPMMTEAIIAMLACSRIGAIHNVVFSGFSSDALADRINDSKSKILVTTNLLYRRG 178

Query: 142 KLDD--------VIDCPRIIVTGAGPRNPDDYD-------FW-TVLDRQQADCVPELLDA 185
           K  D        +++C  I       R  ++++       FW  ++   ++   P  +++
Sbjct: 179 KEIDLKKILDKALLNCNSIKHVVYAKRGIEEFNLVSGKEYFWDELMGGAKSYVEPVPVES 238

Query: 186 SAPFLLMCTSGTTGPAKPLEVPLSAILAFKGYMRD-SIDLREDDHFWNLADPGWAYGLYY 244
             P  ++ TSGTTG  K +       L +     D +  L E D FW  AD GW  G  Y
Sbjct: 239 EHPLFILYTSGTTGSPKGVVHSTGGYLTYATKTMDWTWGLNEMDVFWCTADIGWITGHTY 298

Query: 245 AVTGPLACGRATLFYDGPF---AVDSTCRIIAKYAITNLAGSPTAYRLLIAAGAAFADT- 300
            V GPL+ G   + Y+G       D    I+  + +T L  +PTA R+L+  G  + +T 
Sbjct: 299 VVYGPLSLGATIVLYEGAIDYPEPDRLWGIVENHGVTILYTAPTAIRMLMMYGEKWVNTH 358

Query: 301 VRGRLRVISSAGEPLNPQVIRWFADELG---VVIHDHYGQTEI-GMVLCNHHGLRH-PVR 355
               LR++ S GEP+NP+  +W+   +G     I D Y QTE  G ++    G++  P++
Sbjct: 359 DLSTLRLLGSVGEPINPRAWKWYYKVIGKEKCPICDCYWQTETGGHIIYPPIGIQSVPLK 418

Query: 356 EGSAGYAVPGYRIVVLDDAHRELPPGRPGVLAVDRERSPLCWFEGYFGMPTQ---AFVDR 412
            GSA +   G  + V+D+    +     G L + R    +    G +    +   A+ DR
Sbjct: 419 PGSATFPGIGIDVDVVDNEGNPVDANVKGNLIIKRPWPGM--LAGLWNNDERYRAAYWDR 476

Query: 413 Y---YLSGDIVELNDDGSISFVGRNDDVITTSGYRVGPFDVESALIEHPAVVEAAVIGKP 469
           +   + + D    + DG I  +GR+D+V+  SG+R+G  ++E  L+ +  V E+AV+GKP
Sbjct: 477 FKNKFSTSDYAIKDQDGYIWVLGRSDEVLNVSGHRIGTAELEHELVSNKMVAESAVVGKP 536

Query: 470 DPQRTELIKAFVVLNS--QSLPSTELAEVLRLHVRQRLAAHAYPREIEFVEHLPKTPSGK 527
           D  + E+  AFV+LN   + LPS E+   L  H+R  +     P  I FV  LPKT SGK
Sbjct: 537 DDVKGEVPVAFVILNEKYRELPSNEVKAELIKHIRDTVGPIGTPAMIFFVNKLPKTRSGK 596

Query: 528 LQRFILR 534
           + R IL+
Sbjct: 597 IMRRILK 603